| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227332
Identifier: 21227332
GI number: 21227332
Start: 1457375
End: 1457755
Strand: Reverse
Name: 21227332
Synonym: MM_1230
Alternate gene names: NA
Gene position: 1457755-1457375 (Counterclockwise)
Preceding gene: 21227334
Following gene: 21227331
Centisome position: 35.59
GC content: 32.02
Gene sequence:
>381_bases ATGGAACTTGAAATCAGAATCTGGCTCTTCCATGATATTTTCCTTCTGTATGGTCATTTTCAGATCAGTAAAAATTCAGG GCTTTTTGCTGCAAGAGATTTCTTTTTCAGGCTATTTTGGCATTCACATGTTTTATATTTTATCTCGGAAAATTTTCACG ATTTTTTTGCTGTTATATACAAATTTTTTGACATCTATTATATAGTATTGTCTGCAATAGCTATGAAACTTTCTATAAAT TTTACCTCAATGGTGTTTTGTCCTACCGCCCTGCTCCACTGTCTCATTCTACTGTCATCTCAAATCGTAGTCTTAAACAG GAAAATTGAATATTACTGCAGAATAGAATTACCTCATGAGGTACTTAAACAAATTACTTAA
Upstream 100 bases:
>100_bases CGTAATCCAGAACTTTAAAACCGGGCTTTATACCGGCTTCTTCGAGGATCTTTCTGCGGGGAAAAAAGAAGTCGCGCAAC TTAAATACGAGGGTATTTGC
Downstream 100 bases:
>100_bases ACAAAGTACTCAAACACAGTACTTAAACAAAGTACTGAAGTATCTGGTAGATCTGCATTTACAATTAAAAGGAAGGGAAG TGACCTCTATTATAACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MELEIRIWLFHDIFLLYGHFQISKNSGLFAARDFFFRLFWHSHVLYFISENFHDFFAVIYKFFDIYYIVLSAIAMKLSIN FTSMVFCPTALLHCLILLSSQIVVLNRKIEYYCRIELPHEVLKQIT
Sequences:
>Translated_126_residues MELEIRIWLFHDIFLLYGHFQISKNSGLFAARDFFFRLFWHSHVLYFISENFHDFFAVIYKFFDIYYIVLSAIAMKLSIN FTSMVFCPTALLHCLILLSSQIVVLNRKIEYYCRIELPHEVLKQIT >Mature_126_residues MELEIRIWLFHDIFLLYGHFQISKNSGLFAARDFFFRLFWHSHVLYFISENFHDFFAVIYKFFDIYYIVLSAIAMKLSIN FTSMVFCPTALLHCLILLSSQIVVLNRKIEYYCRIELPHEVLKQIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15185; Mature: 15185
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEIRIWLFHDIFLLYGHFQISKNSGLFAARDFFFRLFWHSHVLYFISENFHDFFAVIY CCEEEEEHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KFFDIYYIVLSAIAMKLSINFTSMVFCPTALLHCLILLSSQIVVLNRKIEYYCRIELPHE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCHH VLKQIT HHHHCC >Mature Secondary Structure MELEIRIWLFHDIFLLYGHFQISKNSGLFAARDFFFRLFWHSHVLYFISENFHDFFAVIY CCEEEEEHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH KFFDIYYIVLSAIAMKLSINFTSMVFCPTALLHCLILLSSQIVVLNRKIEYYCRIELPHE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEECCHH VLKQIT HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA