The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227297

Identifier: 21227297

GI number: 21227297

Start: 1420642

End: 1421517

Strand: Direct

Name: 21227297

Synonym: MM_1195

Alternate gene names: NA

Gene position: 1420642-1421517 (Clockwise)

Preceding gene: 21227296

Following gene: 21227298

Centisome position: 34.68

GC content: 40.53

Gene sequence:

>876_bases
ATGGCGTCTTCAGACTATCCTTCTTCTGAACGTGAGGCAGGGCAGATCTCTTTGCCGGAGTTTGGGAAAATGTTCAAAAT
ACAGACCAGTGAAAAAACCGGATATTTACAAAAGATATTTTCTGCAGGAGCTCCTGTTATTGCTATCGCCTTTGCCGAGT
TGCTGATATTTACCGGAAGAATAAAAGAAGCCGCTGCCACCTATACACTGCTTCTTATCATCCTTTCACTTTCAATAATA
GCCTCAAAAAAACTGGAGACACGCAAGGTTTACCAGGCATTAATACTCCTGCCAGTTCTTCGGCTGGTAAACCTTTCAAT
GCCTATATTCTTTGAAGCCAATATTTACTCATTCGTATTCATGTATTTGCCCATGACAATCCCTATAACAATTGTATCTG
TGTATCAGGAAATTCCAAAAGAAGGAAAAATGGATTTGCTCAGGAAAATGGGGCTTTATCTGCCTTTTTCTCTGCTCGCA
GGTTTGATTTTTGCAGAGGCGGAGTATTTGATCGTACAGACAAGACCGCTTATCCCGGACCTTTCATTTTTTAACCTTCT
TCAACTTACAATTATAATGATTTTTATAGTAGGCCTGATTGAAGAACTCATTTTCAGGGGAATTATCCAGACAAGGCTGG
AAGAGTTTTTAGGACCTGCAGGAGGAGTCCTGCTTGCAAGTCTTCTGTTTGGGGTAATGCACTCGAGTTATGGTACTTTT
TACGAAATAGTATATACTTTTCTTGCAGGAGGTATTCTCGGGTATTTCTTTTACAGAACGAAAAGCCTTCCTCTCGTTGT
AATGATTCACGGTTTCATAAATATATTCTTATTCGGGATAATTCCGCACCTGGGTCCGGGACTGGGTCTGGTATAA

Upstream 100 bases:

>100_bases
ATAACATGAAACTGGAGTTTCTGCTTTTTAACGAAACCGAAAAGAGTATACCTTACAGGAATACGCACCTCTGGATAAAT
GTCACAAAGGAGACCTGAAG

Downstream 100 bases:

>100_bases
AAATAGAAGCCGGTTGAGAAAATAAAAAAAGCCGTGCTGAGCAGATTATACAAATTAAACAAACTGGCGAAGGTTAAACC
GGGGAGGGAATTTATGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MASSDYPSSEREAGQISLPEFGKMFKIQTSEKTGYLQKIFSAGAPVIAIAFAELLIFTGRIKEAAATYTLLLIILSLSII
ASKKLETRKVYQALILLPVLRLVNLSMPIFFEANIYSFVFMYLPMTIPITIVSVYQEIPKEGKMDLLRKMGLYLPFSLLA
GLIFAEAEYLIVQTRPLIPDLSFFNLLQLTIIMIFIVGLIEELIFRGIIQTRLEEFLGPAGGVLLASLLFGVMHSSYGTF
YEIVYTFLAGGILGYFFYRTKSLPLVVMIHGFINIFLFGIIPHLGPGLGLV

Sequences:

>Translated_291_residues
MASSDYPSSEREAGQISLPEFGKMFKIQTSEKTGYLQKIFSAGAPVIAIAFAELLIFTGRIKEAAATYTLLLIILSLSII
ASKKLETRKVYQALILLPVLRLVNLSMPIFFEANIYSFVFMYLPMTIPITIVSVYQEIPKEGKMDLLRKMGLYLPFSLLA
GLIFAEAEYLIVQTRPLIPDLSFFNLLQLTIIMIFIVGLIEELIFRGIIQTRLEEFLGPAGGVLLASLLFGVMHSSYGTF
YEIVYTFLAGGILGYFFYRTKSLPLVVMIHGFINIFLFGIIPHLGPGLGLV
>Mature_290_residues
ASSDYPSSEREAGQISLPEFGKMFKIQTSEKTGYLQKIFSAGAPVIAIAFAELLIFTGRIKEAAATYTLLLIILSLSIIA
SKKLETRKVYQALILLPVLRLVNLSMPIFFEANIYSFVFMYLPMTIPITIVSVYQEIPKEGKMDLLRKMGLYLPFSLLAG
LIFAEAEYLIVQTRPLIPDLSFFNLLQLTIIMIFIVGLIEELIFRGIIQTRLEEFLGPAGGVLLASLLFGVMHSSYGTFY
EIVYTFLAGGILGYFFYRTKSLPLVVMIHGFINIFLFGIIPHLGPGLGLV

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32480; Mature: 32348

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSDYPSSEREAGQISLPEFGKMFKIQTSEKTGYLQKIFSAGAPVIAIAFAELLIFTGR
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IKEAAATYTLLLIILSLSIIASKKLETRKVYQALILLPVLRLVNLSMPIFFEANIYSFVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH
MYLPMTIPITIVSVYQEIPKEGKMDLLRKMGLYLPFSLLAGLIFAEAEYLIVQTRPLIPD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCC
LSFFNLLQLTIIMIFIVGLIEELIFRGIIQTRLEEFLGPAGGVLLASLLFGVMHSSYGTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH
YEIVYTFLAGGILGYFFYRTKSLPLVVMIHGFINIFLFGIIPHLGPGLGLV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASSDYPSSEREAGQISLPEFGKMFKIQTSEKTGYLQKIFSAGAPVIAIAFAELLIFTGR
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IKEAAATYTLLLIILSLSIIASKKLETRKVYQALILLPVLRLVNLSMPIFFEANIYSFVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH
MYLPMTIPITIVSVYQEIPKEGKMDLLRKMGLYLPFSLLAGLIFAEAEYLIVQTRPLIPD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCC
LSFFNLLQLTIIMIFIVGLIEELIFRGIIQTRLEEFLGPAGGVLLASLLFGVMHSSYGTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH
YEIVYTFLAGGILGYFFYRTKSLPLVVMIHGFINIFLFGIIPHLGPGLGLV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA