Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227298

Identifier: 21227298

GI number: 21227298

Start: 1421632

End: 1422468

Strand: Direct

Name: 21227298

Synonym: MM_1196

Alternate gene names: NA

Gene position: 1421632-1422468 (Clockwise)

Preceding gene: 21227297

Following gene: 21227299

Centisome position: 34.7

GC content: 42.41

Gene sequence:

>837_bases
TTGAACAGGACTGGATTAAAGCTCCTTTTCTGCTTATTAATCACACTTTCTCTCTTTTTCGGGTGTCTGACTCATTCTGC
AAATGCTGAGATAGTAGAGTGGGGAGTAACCCCTGAAAACCCGGAGAAAGGGGATACAATAATAATCAGCGGACTTGCCT
CACCTGAAGAAGAGGTGGGAGTTTCAATTTCTTTTGAAAAGACAATTCCAGTTTACCTTGGAGAGTACACTTACGAGTTA
GAAAACATCGAGGTTCTCAATTTTAATAATCTCTTAACTATAAGGACAGAAGGAGTAGAGAGCCTTAAAGTAAAAATGAA
AATGGTTCTCTCAAAAACAGAAGCTACCCGGGCGGAAGATGGGACCGCTACCGTGTCCTTTTCCGGGGTATCTCCTGGAA
AGTATAAGATAAGGGTAGAAGGCGCGGCAGAAGAAGGAGCCTCGGGTGTTAACCTGAAGGTTACATCAGTCCAGAAATTG
AAAGCTGGAAAAGACGGAAAATTCAATTATATATACAGAACGGAGTCGGTTCCTTCAGGCAAGCTTGAGGTCAGAGTGGG
AAATTCGGAAAGGGAAATCATACTTGATGCAAAAGAAAAAACCCCTGAACCTGTGAACGTGGAAAATGAGGAAAAACGCA
GCATTTACCTGGCTGAAAGTTCATGGGACGAAGATAATTCTGAGGCTGCAATTGCAGGAGAAGTCCCTTCAAAAGGGCTT
GAAAAAGAGCAAAAAAATCAGGGACATTACAACAACCAGGCCTCCAATTTCTTTTATCTGCTTGCCGGAGCCCTGGCAGG
ATTCGGATGTTTACAGGTAATTAAAAGAAAAAAGTAA

Upstream 100 bases:

>100_bases
TGAGAAAATAAAAAAAGCCGTGCTGAGCAGATTATACAAATTAAACAAACTGGCGAAGGTTAAACCGGGGAGGGAATTTA
TGGGATCCGAGCTGCTCAAA

Downstream 100 bases:

>100_bases
AAATATTTTTATCCCCTGCTGCCCCTGTGCCCCGCAGATTATATAAAACACTGCTTTCTTTAAAGGAAAGCAAAATGTTT
TATTAACAGGATTCAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVGVSISFEKTIPVYLGEYTYEL
ENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAEDGTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKL
KAGKDGKFNYIYRTESVPSGKLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL
EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK

Sequences:

>Translated_278_residues
MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVGVSISFEKTIPVYLGEYTYEL
ENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAEDGTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKL
KAGKDGKFNYIYRTESVPSGKLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL
EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK
>Mature_278_residues
MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVGVSISFEKTIPVYLGEYTYEL
ENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAEDGTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKL
KAGKDGKFNYIYRTESVPSGKLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL
EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30512; Mature: 30512

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHC
VSISFEKTIPVYLGEYTYELENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAED
EEEEECCCCCEEECCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCC
GTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKLKAGKDGKFNYIYRTESVPSG
CEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHCCCCCCEEEEEECCCCCCC
KLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL
EEEEEECCCCCEEEEECHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC
EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK
CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRTGLKLLFCLLITLSLFFGCLTHSANAEIVEWGVTPENPEKGDTIIISGLASPEEEVG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHC
VSISFEKTIPVYLGEYTYELENIEVLNFNNLLTIRTEGVESLKVKMKMVLSKTEATRAED
EEEEECCCCCEEECCEEEEECCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCC
GTATVSFSGVSPGKYKIRVEGAAEEGASGVNLKVTSVQKLKAGKDGKFNYIYRTESVPSG
CEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEHHHHCCCCCCEEEEEECCCCCCC
KLEVRVGNSEREIILDAKEKTPEPVNVENEEKRSIYLAESSWDEDNSEAAIAGEVPSKGL
EEEEEECCCCCEEEEECHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC
EKEQKNQGHYNNQASNFFYLLAGALAGFGCLQVIKRKK
CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA