Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227259

Identifier: 21227259

GI number: 21227259

Start: 1376323

End: 1377009

Strand: Direct

Name: 21227259

Synonym: MM_1157

Alternate gene names: NA

Gene position: 1376323-1377009 (Clockwise)

Preceding gene: 21227258

Following gene: 21227260

Centisome position: 33.6

GC content: 45.85

Gene sequence:

>687_bases
TTGGTCACCCTCCCCGGAGCTGCCTCAGCTGCAGCTAACAGCTGGGAACTGGTCCCTGAAAGCCCGGTGGCCGGGGATAT
AATAGAGATAAAAGGGTCCAATTTCACTGGAGATACGGCTGAGATACTTGTATCCTTTGAAAAAGATGTTCCGGTCTCAG
AAGGCAGATATGAGTATTTGCTTGAAAATGTGGAAATCTCACCCGGATTCAAGAACCGTTTCAATGTACAGGCTAAAGGA
GCCGAAGACCTGAACGTGAGGGTAAAAATGATACTGTGGATAAGCAGAACTGCAAAGGCAAAAGGAGGAGTTGCAGAGAT
ATCGCAGTCCGCTGTACCTCCAGGGACTTATCAGATCAGGATAGATGGAAAGTCAAATGCCTCCGAGGTCAAACTCAGGA
TTACAGGTCGCCAGCAGATGGAAGTCAATTCGGGCAATTTCAGTTATAGATATAATACAGAATCCATACCAGCAGGCAAT
TTTGAGATAAAAGCCGGGAACACCACAAAGCAGGTTACCCTGAAGCCGGCAGAAAAACCGCCTTCAGACGTAAATACTTC
ACCAGGAAAGAAAGAAAGCTCAAAAAAGGATTTTTCCGGGGAATGGAAAAACTGGAATATACTGGCAGCAGGAACCTTAA
CCGGAGTGATACTGCTCCTGTTTTATTCGAGGAGAAAAAAGCGTTAA

Upstream 100 bases:

>100_bases
TAAAGGAACCACGTTCACAAAATTGGTTTTTACTGGTCTTACGTCCCGGAAAAGTGGAAAAAAGCTAAAGTTTCTGCTTT
AGCTTTCTTTATTCATATCT

Downstream 100 bases:

>100_bases
AATTATTGAAATTTTAAAGAGTAAATTCGTGCAGAAGTGATTTTCAAACCTGTAAAAGTTTGTAAAGGCATTTTCAATGA
ATTTAATAGCAAAATAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVTLPGAASAAANSWELVPESPVAGDIIEIKGSNFTGDTAEILVSFEKDVPVSEGRYEYLLENVEISPGFKNRFNVQAKG
AEDLNVRVKMILWISRTAKAKGGVAEISQSAVPPGTYQIRIDGKSNASEVKLRITGRQQMEVNSGNFSYRYNTESIPAGN
FEIKAGNTTKQVTLKPAEKPPSDVNTSPGKKESSKKDFSGEWKNWNILAAGTLTGVILLLFYSRRKKR

Sequences:

>Translated_228_residues
MVTLPGAASAAANSWELVPESPVAGDIIEIKGSNFTGDTAEILVSFEKDVPVSEGRYEYLLENVEISPGFKNRFNVQAKG
AEDLNVRVKMILWISRTAKAKGGVAEISQSAVPPGTYQIRIDGKSNASEVKLRITGRQQMEVNSGNFSYRYNTESIPAGN
FEIKAGNTTKQVTLKPAEKPPSDVNTSPGKKESSKKDFSGEWKNWNILAAGTLTGVILLLFYSRRKKR
>Mature_228_residues
MVTLPGAASAAANSWELVPESPVAGDIIEIKGSNFTGDTAEILVSFEKDVPVSEGRYEYLLENVEISPGFKNRFNVQAKG
AEDLNVRVKMILWISRTAKAKGGVAEISQSAVPPGTYQIRIDGKSNASEVKLRITGRQQMEVNSGNFSYRYNTESIPAGN
FEIKAGNTTKQVTLKPAEKPPSDVNTSPGKKESSKKDFSGEWKNWNILAAGTLTGVILLLFYSRRKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24914; Mature: 24914

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLPGAASAAANSWELVPESPVAGDIIEIKGSNFTGDTAEILVSFEKDVPVSEGRYEYL
CEECCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHEE
LENVEISPGFKNRFNVQAKGAEDLNVRVKMILWISRTAKAKGGVAEISQSAVPPGTYQIR
EECCEECCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEE
IDGKSNASEVKLRITGRQQMEVNSGNFSYRYNTESIPAGNFEIKAGNTTKQVTLKPAEKP
ECCCCCCCEEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCC
PSDVNTSPGKKESSKKDFSGEWKNWNILAAGTLTGVILLLFYSRRKKR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTLPGAASAAANSWELVPESPVAGDIIEIKGSNFTGDTAEILVSFEKDVPVSEGRYEYL
CEECCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHEE
LENVEISPGFKNRFNVQAKGAEDLNVRVKMILWISRTAKAKGGVAEISQSAVPPGTYQIR
EECCEECCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEE
IDGKSNASEVKLRITGRQQMEVNSGNFSYRYNTESIPAGNFEIKAGNTTKQVTLKPAEKP
ECCCCCCCEEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEEEECCCCC
PSDVNTSPGKKESSKKDFSGEWKNWNILAAGTLTGVILLLFYSRRKKR
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA