Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227258

Identifier: 21227258

GI number: 21227258

Start: 1374221

End: 1375729

Strand: Direct

Name: 21227258

Synonym: MM_1156

Alternate gene names: NA

Gene position: 1374221-1375729 (Clockwise)

Preceding gene: 21227257

Following gene: 21227259

Centisome position: 33.55

GC content: 45.39

Gene sequence:

>1509_bases
ATGGATAAAAAGACAGAAAAATCAGCAGAAAAGCCATCTAATAACGAGAAAAAGTCAAGTTTTGCGTCGGATGTACTGAC
ACTTGCAGGCGGAACAACTTTTGCCCAGATCCTTACGATTCTGGCAGCCCCTGTCCTTACCCGGCTTTACGGACCTGAAG
ACTTTGGAGTCTGGGCTCTTTACGTCTCCATCACCAGCATTATAAGTGTTATTTCATGCCTCAGGTATGACTATTCTATA
ATGCTGCCAGAATCAGACAGGGAGGCGGTAAACCTTTTAGGTCTTAGCGTCCTTGCAGTCCTGACTGTGACCGGATTAAC
CGTGCCAGCAGTATGGTATTTTAAAGCCCAGCTGGTTGATCTCTTAAATGCCCCGCAGATAGAGGGTTATTTATGGCTTA
TCCCTCCGTTCGTGTTTGTAAACGGGATTTTTCTTGCACTCACCCACTGGAACTCAAGAACAAAGCTCTTCAAGAGGCTC
TCTTTCTCAAAGATTTCCAGTTCGGTTTCAACCACTGCAACCCAGATAGCCCTGGGACTTATGCAGCACCCTCCGACCTC
AGCCGGTTTAATAGGGGGCAGTCTTGCAGGTCAGTCTATAGCGACATTTGTGCTTGGGGGCCAGATCTGGAGAGATGATA
AAAACCTGATAAAAAAGAGCCTGAGCTGGAAGGAAATATATGAAGGCGCTGTGCGTCACCGCAACCTTCCTCTTATAGAC
AGCTGGTCTGCCCTTATGAACTCGGTTTCCTGGCAGCTCCCGGCTTTTCTACTCTCAGCGTTTTTTACTCCCGCAATAGT
CGGCTTCTATTCCCTTGGGTTCCGCCTGCTTCAGTTGCCTATGAGTTTTATCGGCGGCTCAATCTCACAGGTATTTTATC
AGAGGGCATCCAGAGCAGTATCCGACGGCACCCTCAGCATTCTTGTAGAAAGTGTTTTCAGAATACTTGTGATTATAGGC
ATGTTTCCTATACTGATTCTCACAATTGTAGGCGGAGACGTCTTTACAGTAGTTTTCGGGAGAGCCTGGACGGAAGCAGG
AGTATATGCCCAGATCCTGAGCCTCTGGGCTTTTATATGGTTTATCTCATCCCCCTTGACCACAATATACCTGGTTGTGG
AAGAGCACCATTTCGGCTTCAGCTATAACTTTTTCAACCTTACAACCCGCTTCCTTTCTCTTACAATCGGAGGCATTCTC
GGAAACGCTCGTATAGCCCTTATCCTTTTTTCAATATCAGGTATTGTGGTATATGGGTATCTGTGCCTGAAAATGATGTA
TTACTCAGGAGTAAAGACTTCGAAAGCCCTTAAAATAGTATTCTCAAACTTTGTCCTTTTTATCCCTGCGGGAGTGGTTC
TTACTGCGCTCAAGACCGCGGGAATAAACCAGATCCTTCTTGTTGTAATATCCGGTTTGATAATCTGCATTTACTATCTG
TATATATTGAAAATGGATAAGCAGATGAAAGAGATTATTGCCGAGTTCAAACTTCCGGGAAAAGCGTAA

Upstream 100 bases:

>100_bases
CTTCAGGGAAATATGCTTCAGGGGCATTAAATAACCCCACACAGGAATTAAAAGTTTTAGATATCTGGCTGAAAAACAAC
TTCCTTCACAGGGTACTGCT

Downstream 100 bases:

>100_bases
GAGACTGAAATTTACACGTCTACACCTCAGGATGATCAGGACAAACGAAAATAATGCTGAAAAATGTTATTAACTCAATT
GGTTTCCATAGCCCCGGACT

Product: O-antigen translocase

Products: NA

Alternate protein names: O-Antigen Translocase; O-Antigen And Teichoic Acid-Like Export Protein; RfbX Family O-Antigen/Teichoic Acid Export Protein; WzxA Protein; Polysacharide Biosyntheis Protein; O-Antigen Flippase Wzx

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MDKKTEKSAEKPSNNEKKSSFASDVLTLAGGTTFAQILTILAAPVLTRLYGPEDFGVWALYVSITSIISVISCLRYDYSI
MLPESDREAVNLLGLSVLAVLTVTGLTVPAVWYFKAQLVDLLNAPQIEGYLWLIPPFVFVNGIFLALTHWNSRTKLFKRL
SFSKISSSVSTTATQIALGLMQHPPTSAGLIGGSLAGQSIATFVLGGQIWRDDKNLIKKSLSWKEIYEGAVRHRNLPLID
SWSALMNSVSWQLPAFLLSAFFTPAIVGFYSLGFRLLQLPMSFIGGSISQVFYQRASRAVSDGTLSILVESVFRILVIIG
MFPILILTIVGGDVFTVVFGRAWTEAGVYAQILSLWAFIWFISSPLTTIYLVVEEHHFGFSYNFFNLTTRFLSLTIGGIL
GNARIALILFSISGIVVYGYLCLKMMYYSGVKTSKALKIVFSNFVLFIPAGVVLTALKTAGINQILLVVISGLIICIYYL
YILKMDKQMKEIIAEFKLPGKA

Sequences:

>Translated_502_residues
MDKKTEKSAEKPSNNEKKSSFASDVLTLAGGTTFAQILTILAAPVLTRLYGPEDFGVWALYVSITSIISVISCLRYDYSI
MLPESDREAVNLLGLSVLAVLTVTGLTVPAVWYFKAQLVDLLNAPQIEGYLWLIPPFVFVNGIFLALTHWNSRTKLFKRL
SFSKISSSVSTTATQIALGLMQHPPTSAGLIGGSLAGQSIATFVLGGQIWRDDKNLIKKSLSWKEIYEGAVRHRNLPLID
SWSALMNSVSWQLPAFLLSAFFTPAIVGFYSLGFRLLQLPMSFIGGSISQVFYQRASRAVSDGTLSILVESVFRILVIIG
MFPILILTIVGGDVFTVVFGRAWTEAGVYAQILSLWAFIWFISSPLTTIYLVVEEHHFGFSYNFFNLTTRFLSLTIGGIL
GNARIALILFSISGIVVYGYLCLKMMYYSGVKTSKALKIVFSNFVLFIPAGVVLTALKTAGINQILLVVISGLIICIYYL
YILKMDKQMKEIIAEFKLPGKA
>Mature_502_residues
MDKKTEKSAEKPSNNEKKSSFASDVLTLAGGTTFAQILTILAAPVLTRLYGPEDFGVWALYVSITSIISVISCLRYDYSI
MLPESDREAVNLLGLSVLAVLTVTGLTVPAVWYFKAQLVDLLNAPQIEGYLWLIPPFVFVNGIFLALTHWNSRTKLFKRL
SFSKISSSVSTTATQIALGLMQHPPTSAGLIGGSLAGQSIATFVLGGQIWRDDKNLIKKSLSWKEIYEGAVRHRNLPLID
SWSALMNSVSWQLPAFLLSAFFTPAIVGFYSLGFRLLQLPMSFIGGSISQVFYQRASRAVSDGTLSILVESVFRILVIIG
MFPILILTIVGGDVFTVVFGRAWTEAGVYAQILSLWAFIWFISSPLTTIYLVVEEHHFGFSYNFFNLTTRFLSLTIGGIL
GNARIALILFSISGIVVYGYLCLKMMYYSGVKTSKALKIVFSNFVLFIPAGVVLTALKTAGINQILLVVISGLIICIYYL
YILKMDKQMKEIIAEFKLPGKA

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55366; Mature: 55366

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKTEKSAEKPSNNEKKSSFASDVLTLAGGTTFAQILTILAAPVLTRLYGPEDFGVWAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
YVSITSIISVISCLRYDYSIMLPESDREAVNLLGLSVLAVLTVTGLTVPAVWYFKAQLVD
HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLNAPQIEGYLWLIPPFVFVNGIFLALTHWNSRTKLFKRLSFSKISSSVSTTATQIALGL
HHCCCCCCCEEEEECHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQHPPTSAGLIGGSLAGQSIATFVLGGQIWRDDKNLIKKSLSWKEIYEGAVRHRNLPLID
HCCCCCCCCCCCCHHCHHHHHHHHHCCHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCH
SWSALMNSVSWQLPAFLLSAFFTPAIVGFYSLGFRLLQLPMSFIGGSISQVFYQRASRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SDGTLSILVESVFRILVIIGMFPILILTIVGGDVFTVVFGRAWTEAGVYAQILSLWAFIW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISSPLTTIYLVVEEHHFGFSYNFFNLTTRFLSLTIGGILGNARIALILFSISGIVVYGY
HHHCCHHEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LCLKMMYYSGVKTSKALKIVFSNFVLFIPAGVVLTALKTAGINQILLVVISGLIICIYYL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YILKMDKQMKEIIAEFKLPGKA
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKKTEKSAEKPSNNEKKSSFASDVLTLAGGTTFAQILTILAAPVLTRLYGPEDFGVWAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
YVSITSIISVISCLRYDYSIMLPESDREAVNLLGLSVLAVLTVTGLTVPAVWYFKAQLVD
HHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLNAPQIEGYLWLIPPFVFVNGIFLALTHWNSRTKLFKRLSFSKISSSVSTTATQIALGL
HHCCCCCCCEEEEECHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQHPPTSAGLIGGSLAGQSIATFVLGGQIWRDDKNLIKKSLSWKEIYEGAVRHRNLPLID
HCCCCCCCCCCCCHHCHHHHHHHHHCCHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCH
SWSALMNSVSWQLPAFLLSAFFTPAIVGFYSLGFRLLQLPMSFIGGSISQVFYQRASRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SDGTLSILVESVFRILVIIGMFPILILTIVGGDVFTVVFGRAWTEAGVYAQILSLWAFIW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISSPLTTIYLVVEEHHFGFSYNFFNLTTRFLSLTIGGILGNARIALILFSISGIVVYGY
HHHCCHHEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LCLKMMYYSGVKTSKALKIVFSNFVLFIPAGVVLTALKTAGINQILLVVISGLIICIYYL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YILKMDKQMKEIIAEFKLPGKA
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA