| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is wecC [H]
Identifier: 21227256
GI number: 21227256
Start: 1371087
End: 1372523
Strand: Direct
Name: wecC [H]
Synonym: MM_1154
Alternate gene names: 21227256
Gene position: 1371087-1372523 (Clockwise)
Preceding gene: 21227255
Following gene: 21227257
Centisome position: 33.47
GC content: 47.6
Gene sequence:
>1437_bases GTGATAAGTATGAGCAAATTAGAAAAACTTTTGAAGGAACGCGGCCCTATAAAAAAGATAGGCGTTCTTGGCATGGGATA TGTAGGAATCCCTGCTGCTGTCCTTTTTGCAGATGCTCCCTGTTTTGAGAAAGTCCTCGGCTTCCAGCGCAACTCAAAAA GCTCGGGTTATAAAATTGAAATGCTTAACAGAGGGGAGAGCCCGCTCAAAGGGGAAGAGCCCGGCCTTGAAGAGCTTATT GGAAAGGTTGTAAAAGCCGGAAAGTTCGAATGCACACCTGATTTTTCAAGGATTTCCGAGCTTGATGCAGTTACACTTGC AATTCAGACTCCTTTTGCAAATCCCAAAGACCTGGAACCTGATTTCAGCGCGCTTATAGATGGTATCAGAAATGTGGGCA AATACCTTAAACCGGGGATGCTTGTGGTCCTGGAATCCACAATTACTCCCGGGACAACTGAAGGCATGGCAAAACAGATC CTTGAAGAAGAGTCAGGGCTAAAAGCAGGTGAAGATTTTGCCCTTGCACACGCCCCCGAAAGAGTGATGGTAGGCAGGCT TTTAAAGAACATCAGAGAACACGACAGGATCGTGGGCGGAATAGATGAAGCAAGCACAAAAAGGGCTGTTGAACTGTACT CCCCTGTGCTCACAGTCGGACAGGTTATCCCTATGAGTGCAACAGCGGCTGAGGTCACAAAAACCGCAGAAAACACTTTT CGCGACCTTCAGATTGCAGCAATCAACCAGCTCGCCCTTTACTGTGAAGCTATGGGCATAAATGTCTATGATGTCAGGAC AGGAGTCGACAGCTTAAAAGGCGAGGGAATTACAAGGGCTGTCCTCTGGCCCGGAGCAGGAGTTGGAGGCCACTGCCTGA CCAAAGACACTTACCACCTTGAAAGAGGAGTTAAAATCGGGAGGGGAGAACTTGACTATCCGGAAGGTGCAGATTCTATT TACGTGCTTGCAAGGAAAGTCAATGATTTCATGCCCGCACACATGTATAACCTGACCGTTGCAGCCCTTGAAAGGCTCGG GAAGAAGATGGATGGCTCAAAAGTCGCAATGCTCGGCTGGGCATTTATCAAAGATTCGGACGATGCCAGAAACACACCTT CGGAACCATACAGGGACCTCTGCCTGAAAGCCGGGGCCAGCGTAATGGTACACGACCCTTACGTTGTCAATTATCCGGGC GTTGAAATTTCAGATAATCTGGAAGAGGTTGTCAGAAACGCAGACGCTATAGTTGTACTTGCAGGGCACAGTGCATACTC CAGCCTTAAAGCTGATTGGGCAAAGAAAGTAAGCGCAAAAGCAAATCCGGTTATTATTGATGGGAGAAATGTCATCGAGC CGGACGAATTTATCGGGAAAGGGTTCGTTTACAAGGGAATTGGGAGGGGGGACAAAAACTCACATAAAATAAAATGA
Upstream 100 bases:
>100_bases AAGTGGGGAAGTAAACCGCATAAAAGATAAAGGGTGAAGGGAAAAAGAAACCGAAAGCCTCGGGAAAATTCAAAAAAATT TTAAAAAACAATACCGGAAA
Downstream 100 bases:
>100_bases AGGGGAAAATTCCCCTTTGATATATTTTATATTCTGGGAAACAGGGCGAAAATTATGTTTGATAAACTGAAAGAAAACGA AGAACTCTGGGACCTCTTTA
Product: NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MISMSKLEKLLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELI GKVVKAGKFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQI LEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTF RDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSI YVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPG VEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNVIEPDEFIGKGFVYKGIGRGDKNSHKIK
Sequences:
>Translated_478_residues MISMSKLEKLLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELI GKVVKAGKFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQI LEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTF RDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSI YVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPG VEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNVIEPDEFIGKGFVYKGIGRGDKNSHKIK >Mature_478_residues MISMSKLEKLLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELI GKVVKAGKFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQI LEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTF RDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSI YVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPG VEISDNLEEVVRNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNVIEPDEFIGKGFVYKGIGRGDKNSHKIK
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=483, Percent_Identity=25.2587991718427, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI296040438, Length=358, Percent_Identity=24.8603351955307, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI296040443, Length=318, Percent_Identity=26.4150943396226, Blast_Score=86, Evalue=8e-17, Organism=Escherichia coli, GI48994968, Length=430, Percent_Identity=31.6279069767442, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1788340, Length=293, Percent_Identity=28.3276450511945, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560350, Length=490, Percent_Identity=22.8571428571429, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI17136908, Length=481, Percent_Identity=24.948024948025, Blast_Score=114, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 51826; Mature: 51826
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISMSKLEKLLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIE CCCHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEE MLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSRISELDAVTLAIQTPFANPKDLEP EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCCCCC DFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPE CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCH RVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHL HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHH ERGVKIGRGELDYPEGADSIYVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGW HCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE AFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVL EEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEECCCCCCCCCHHHHHCCCCEEEEE AGHSAYSSLKADWAKKVSAKANPVIIDGRNVIEPDEFIGKGFVYKGIGRGDKNSHKIK ECCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MISMSKLEKLLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIE CCCHHHHHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEE MLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSRISELDAVTLAIQTPFANPKDLEP EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCCCCC DFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPE CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCH RVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHL HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHH ERGVKIGRGELDYPEGADSIYVLARKVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGW HCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEE AFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVNYPGVEISDNLEEVVRNADAIVVL EEEECCCCCCCCCCCHHHHHHHHCCCEEEEECCEEEECCCCCCCCCHHHHHCCCCEEEEE AGHSAYSSLKADWAKKVSAKANPVIIDGRNVIEPDEFIGKGFVYKGIGRGDKNSHKIK ECCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA