Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227257

Identifier: 21227257

GI number: 21227257

Start: 1372578

End: 1373624

Strand: Direct

Name: 21227257

Synonym: MM_1155

Alternate gene names: NA

Gene position: 1372578-1373624 (Clockwise)

Preceding gene: 21227256

Following gene: 21227258

Centisome position: 33.51

GC content: 43.65

Gene sequence:

>1047_bases
ATGTTTGATAAACTGAAAGAAAACGAAGAACTCTGGGACCTCTTTACCAGGAAAGAAGAGTACAGCGTAACTTTTCGCGA
CGCGTATGAGAGGTTCCCTTATTATCTGAGCAGTCACAGGAATATCTTTGAGCCGAGGGTTTCCAAATTCCTGGTAGAAA
ACGGGTTAAAACCTCAGTATCCGGACGGGAAAAAGTTCGCTGTCTGCCTCACACATGATATCGATGCGATTTATCCGGAC
AAATTGTATCCGATTGTCGGGCCAGTAAAAGCCCTTTCCAGGGGGAAACTGGCTGAAGCGGTAAAAGCTCCTTTTTCAAG
AGTTAACAGGAAATGGAATCCTTGCTGGAACTTCAGGGAAATACTGGCTCTTGAAGCAAAGTACAACGCAAAATCCAGTT
TCTATTTTCTTGCCCTGACGTCTGAAGAAACCGACTTCAATTATAATATTAAAGATCTTGAAACCGAGCTTGGCTTCATA
TCAGATAGCGGATGGGAAGTCGGACTTCACGGAGGGCACGAGTCTTACAACAGCCTTGAAGATATTAAAGAAAAAAAGAG
GCGACTTGAGGAAGTCCTGGGCAAAAAGGTTGTCGGATACAGAAACCATTATTTAAGGTTCAGAGTACCGGATACCTGGG
AATTATTAAGCAAAGCAGGGTTCAAATACGATACCACATTCGGATATTCGGACTGTGCCGGTTTTAGAAACGGGATGTGC
CATCCTTACAGGCCTTTTAATTTAAATGAGGGACGCCAGATCGATATCCTGGAGATCCCGCTGGTGATAATGGACCGTTC
TCTTTTGAAGGATTACATGCGCCTGAACGTTAAGAAAGCCTGGGAATGTACAAAGCATCTGATCAATACAGTTGAGAAAT
ATAACGGTGTGATCACCATCCTCTGGCACAATAATATGTGCATCGATGGAGAGAACCTCAGGTATTATGAAAAAGTCCTT
GAATACTGCGCCGAGAAAAATGCCTGGATTACCAGTGGAGAGGAAATCTACAACTGGTGGACCAGTAAGATTGAGCCTGG
AAACTAA

Upstream 100 bases:

>100_bases
CAAGGGAATTGGGAGGGGGGACAAAAACTCACATAAAATAAAATGAAGGGGAAAATTCCCCTTTGATATATTTTATATTC
TGGGAAACAGGGCGAAAATT

Downstream 100 bases:

>100_bases
AGTAGACGTATATTGAATTTAGAGAACGATATACCACTACAGAAGGAACATTATACATTACTACTGAGAAATCACAGTTA
TTGAACAAAAAACAGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MFDKLKENEELWDLFTRKEEYSVTFRDAYERFPYYLSSHRNIFEPRVSKFLVENGLKPQYPDGKKFAVCLTHDIDAIYPD
KLYPIVGPVKALSRGKLAEAVKAPFSRVNRKWNPCWNFREILALEAKYNAKSSFYFLALTSEETDFNYNIKDLETELGFI
SDSGWEVGLHGGHESYNSLEDIKEKKRRLEEVLGKKVVGYRNHYLRFRVPDTWELLSKAGFKYDTTFGYSDCAGFRNGMC
HPYRPFNLNEGRQIDILEIPLVIMDRSLLKDYMRLNVKKAWECTKHLINTVEKYNGVITILWHNNMCIDGENLRYYEKVL
EYCAEKNAWITSGEEIYNWWTSKIEPGN

Sequences:

>Translated_348_residues
MFDKLKENEELWDLFTRKEEYSVTFRDAYERFPYYLSSHRNIFEPRVSKFLVENGLKPQYPDGKKFAVCLTHDIDAIYPD
KLYPIVGPVKALSRGKLAEAVKAPFSRVNRKWNPCWNFREILALEAKYNAKSSFYFLALTSEETDFNYNIKDLETELGFI
SDSGWEVGLHGGHESYNSLEDIKEKKRRLEEVLGKKVVGYRNHYLRFRVPDTWELLSKAGFKYDTTFGYSDCAGFRNGMC
HPYRPFNLNEGRQIDILEIPLVIMDRSLLKDYMRLNVKKAWECTKHLINTVEKYNGVITILWHNNMCIDGENLRYYEKVL
EYCAEKNAWITSGEEIYNWWTSKIEPGN
>Mature_348_residues
MFDKLKENEELWDLFTRKEEYSVTFRDAYERFPYYLSSHRNIFEPRVSKFLVENGLKPQYPDGKKFAVCLTHDIDAIYPD
KLYPIVGPVKALSRGKLAEAVKAPFSRVNRKWNPCWNFREILALEAKYNAKSSFYFLALTSEETDFNYNIKDLETELGFI
SDSGWEVGLHGGHESYNSLEDIKEKKRRLEEVLGKKVVGYRNHYLRFRVPDTWELLSKAGFKYDTTFGYSDCAGFRNGMC
HPYRPFNLNEGRQIDILEIPLVIMDRSLLKDYMRLNVKKAWECTKHLINTVEKYNGVITILWHNNMCIDGENLRYYEKVL
EYCAEKNAWITSGEEIYNWWTSKIEPGN

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41066; Mature: 41066

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKLKENEELWDLFTRKEEYSVTFRDAYERFPYYLSSHRNIFEPRVSKFLVENGLKPQY
CCCCCCCCHHHHHHHHCCHHCEEHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDGKKFAVCLTHDIDAIYPDKLYPIVGPVKALSRGKLAEAVKAPFSRVNRKWNPCWNFRE
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH
ILALEAKYNAKSSFYFLALTSEETDFNYNIKDLETELGFISDSGWEVGLHGGHESYNSLE
HHEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCEECCCCEEEEECCCCHHHHHHH
DIKEKKRRLEEVLGKKVVGYRNHYLRFRVPDTWELLSKAGFKYDTTFGYSDCAGFRNGMC
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCEECCCCCHHHHHHHCCCC
HPYRPFNLNEGRQIDILEIPLVIMDRSLLKDYMRLNVKKAWECTKHLINTVEKYNGVITI
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEE
LWHNNMCIDGENLRYYEKVLEYCAEKNAWITSGEEIYNWWTSKIEPGN
EEECCEEECCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFDKLKENEELWDLFTRKEEYSVTFRDAYERFPYYLSSHRNIFEPRVSKFLVENGLKPQY
CCCCCCCCHHHHHHHHCCHHCEEHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDGKKFAVCLTHDIDAIYPDKLYPIVGPVKALSRGKLAEAVKAPFSRVNRKWNPCWNFRE
CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH
ILALEAKYNAKSSFYFLALTSEETDFNYNIKDLETELGFISDSGWEVGLHGGHESYNSLE
HHEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCEECCCCEEEEECCCCHHHHHHH
DIKEKKRRLEEVLGKKVVGYRNHYLRFRVPDTWELLSKAGFKYDTTFGYSDCAGFRNGMC
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCEECCCCCHHHHHHHCCCC
HPYRPFNLNEGRQIDILEIPLVIMDRSLLKDYMRLNVKKAWECTKHLINTVEKYNGVITI
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEE
LWHNNMCIDGENLRYYEKVLEYCAEKNAWITSGEEIYNWWTSKIEPGN
EEECCEEECCCCCHHHHHHHHHHHCCCCEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA