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The map label for this gene is yfbE [C]

Identifier: 21227254

GI number: 21227254

Start: 1368934

End: 1370016

Strand: Direct

Name: yfbE [C]

Synonym: MM_1152

Alternate gene names: 21227254

Gene position: 1368934-1370016 (Clockwise)

Preceding gene: 21227253

Following gene: 21227255

Centisome position: 33.42

GC content: 45.15

Gene sequence:

>1083_bases
ATGATCCCAATCGCCAGGCCCCTGCTGGGCAAGGAAGAGATTGATGCAGTAACAGAGGTCCTGAGTTCAGGAATGATCGC
ACAGGGACCAAAAGTAGAAGAATTTGAGCTTGCTTTTTCCGAGTACACAGGCTGCGAATATGCAGCGGCCGTAAATTCCG
GCACTGCAGCTCTTCATATTGCACTTCTTGCCCACGATATCGGAAAAGAAGATGAAGTAATCACAAGTCCCTTCACATTT
ATTGCCACTGCAAACAGCATCCTCTATACCGGAGCAAAACCTGTTTTTGCAGACATTGAGCCTGATACATACAATATAGA
CCCGGAAAAAATAAAGGAAAAGATAAATTCAAAAACGAAAGCCATTATGCCCGTCCACCTTTACGGGCAGTCTGCTGACA
TGAAAGCCATAATGGAAATCGCTGAAGACTACAAACTTGTTGTGATAGAAGATGCCTGCCAGGCACATGGTGCAGAGTGC
CTGGGGAAGAAAGCAGGCAGTTTCGGGACAGGAGCATTCAGCTTTTACCCGACCAAAAACATGACAACAAGCGAAGGCGG
AATAATTACAACCAGCGACCGGGAAATTGCAGAAAAATCAAAAATGATCAGGGCTCACGGCTCCAGAGTACGCTACCTGC
ATGAAATGCTGGGCTTTAACTTGCGCATGACTGACATTGCAGCCGCAATAGGACTTGCTCAGCTTGAAAAACTGGACGGG
TTTAATGCCTCCAGGCAGAAAAATGCAGCCATGCTTTCAGAAGGGCTTAAAAGCATTTCAGGAATTGTACCCGCAACTAC
AAGGAAAGGTTATACCCACGTTTTTCACCAGTACACAATAAGGGCACAAAACAGAGATAAACTGGCAGATTTTTTGAAGG
AAAAAGGCATAGGCACAGGAGTTCACTACCCGATACCTATCCATAAACAGCCTTATTATATGGAGCTTGGATACAAAGAC
TCTCTGCCTATCTCAGATAAAGCAGCAGAAGAGGTTCTTTCCCTTCCTGTACATCCTGCCCTGTCCAGAGACGATGTTCT
GAAAGTAATAAAGGAAGTCAAAGAATTTTATGCAAGTGCCTGA

Upstream 100 bases:

>100_bases
GAACTCCCGGAAGATCTCAAAGAATTAAACAGGATATAAGCCTACTGAAAAAGCTAATCGAAATAAAAGGAACATAATTA
AGATTATAAGAGGTCTAAAA

Downstream 100 bases:

>100_bases
TCAGTTTTCAGGTTGCAATCACATTCTTAAAAAGGAAGTGAAATTTTGATAAGAGTAGGAGTAATAGGCACGGGTGCCAT
GGGCCAGAATCACGTCCGAA

Product: aspartate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MIPIARPLLGKEEIDAVTEVLSSGMIAQGPKVEEFELAFSEYTGCEYAAAVNSGTAALHIALLAHDIGKEDEVITSPFTF
IATANSILYTGAKPVFADIEPDTYNIDPEKIKEKINSKTKAIMPVHLYGQSADMKAIMEIAEDYKLVVIEDACQAHGAEC
LGKKAGSFGTGAFSFYPTKNMTTSEGGIITTSDREIAEKSKMIRAHGSRVRYLHEMLGFNLRMTDIAAAIGLAQLEKLDG
FNASRQKNAAMLSEGLKSISGIVPATTRKGYTHVFHQYTIRAQNRDKLADFLKEKGIGTGVHYPIPIHKQPYYMELGYKD
SLPISDKAAEEVLSLPVHPALSRDDVLKVIKEVKEFYASA

Sequences:

>Translated_360_residues
MIPIARPLLGKEEIDAVTEVLSSGMIAQGPKVEEFELAFSEYTGCEYAAAVNSGTAALHIALLAHDIGKEDEVITSPFTF
IATANSILYTGAKPVFADIEPDTYNIDPEKIKEKINSKTKAIMPVHLYGQSADMKAIMEIAEDYKLVVIEDACQAHGAEC
LGKKAGSFGTGAFSFYPTKNMTTSEGGIITTSDREIAEKSKMIRAHGSRVRYLHEMLGFNLRMTDIAAAIGLAQLEKLDG
FNASRQKNAAMLSEGLKSISGIVPATTRKGYTHVFHQYTIRAQNRDKLADFLKEKGIGTGVHYPIPIHKQPYYMELGYKD
SLPISDKAAEEVLSLPVHPALSRDDVLKVIKEVKEFYASA
>Mature_360_residues
MIPIARPLLGKEEIDAVTEVLSSGMIAQGPKVEEFELAFSEYTGCEYAAAVNSGTAALHIALLAHDIGKEDEVITSPFTF
IATANSILYTGAKPVFADIEPDTYNIDPEKIKEKINSKTKAIMPVHLYGQSADMKAIMEIAEDYKLVVIEDACQAHGAEC
LGKKAGSFGTGAFSFYPTKNMTTSEGGIITTSDREIAEKSKMIRAHGSRVRYLHEMLGFNLRMTDIAAAIGLAQLEKLDG
FNASRQKNAAMLSEGLKSISGIVPATTRKGYTHVFHQYTIRAQNRDKLADFLKEKGIGTGVHYPIPIHKQPYYMELGYKD
SLPISDKAAEEVLSLPVHPALSRDDVLKVIKEVKEFYASA

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=374, Percent_Identity=39.3048128342246, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI2367285, Length=382, Percent_Identity=31.151832460733, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39369; Mature: 39369

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIARPLLGKEEIDAVTEVLSSGMIAQGPKVEEFELAFSEYTGCEYAAAVNSGTAALHI
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHCCCCCHHHHH
ALLAHDIGKEDEVITSPFTFIATANSILYTGAKPVFADIEPDTYNIDPEKIKEKINSKTK
HHHHHHCCCCCCEEECCCCEEEECCEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCC
AIMPVHLYGQSADMKAIMEIAEDYKLVVIEDACQAHGAECLGKKAGSFGTGAFSFYPTKN
EEEEEEEECCCCHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHCCCCCCCCCEEEECCCC
MTTSEGGIITTSDREIAEKSKMIRAHGSRVRYLHEMLGFNLRMTDIAAAIGLAQLEKLDG
CCCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
FNASRQKNAAMLSEGLKSISGIVPATTRKGYTHVFHQYTIRAQNRDKLADFLKEKGIGTG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECCCHHHHHHHHHHCCCCCC
VHYPIPIHKQPYYMELGYKDSLPISDKAAEEVLSLPVHPALSRDDVLKVIKEVKEFYASA
CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPIARPLLGKEEIDAVTEVLSSGMIAQGPKVEEFELAFSEYTGCEYAAAVNSGTAALHI
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHCCCCCHHHHH
ALLAHDIGKEDEVITSPFTFIATANSILYTGAKPVFADIEPDTYNIDPEKIKEKINSKTK
HHHHHHCCCCCCEEECCCCEEEECCEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCC
AIMPVHLYGQSADMKAIMEIAEDYKLVVIEDACQAHGAECLGKKAGSFGTGAFSFYPTKN
EEEEEEEECCCCHHHHHHHHHCCCEEEEEECHHHHCCHHHHHHCCCCCCCCCEEEECCCC
MTTSEGGIITTSDREIAEKSKMIRAHGSRVRYLHEMLGFNLRMTDIAAAIGLAQLEKLDG
CCCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
FNASRQKNAAMLSEGLKSISGIVPATTRKGYTHVFHQYTIRAQNRDKLADFLKEKGIGTG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECCCHHHHHHHHHHCCCCCC
VHYPIPIHKQPYYMELGYKDSLPISDKAAEEVLSLPVHPALSRDDVLKVIKEVKEFYASA
CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]