| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is mshA [H]
Identifier: 21227240
GI number: 21227240
Start: 1346281
End: 1347486
Strand: Direct
Name: mshA [H]
Synonym: MM_1138
Alternate gene names: 21227240
Gene position: 1346281-1347486 (Clockwise)
Preceding gene: 21227236
Following gene: 21227243
Centisome position: 32.87
GC content: 40.88
Gene sequence:
>1206_bases ATGAGAGTACTGGAAGTATGTCAGGAGTTCCCTAACAGGTATTATCCACAGCTTGGAACATTTATAAAGCAAAGTATAGA CTCTATCGCAAATCAGGGAGTAGAATTGACAGTTATTTCTCCAAAAGCTTTTGTACTTCCTTTTTCTGCATTTCCGTACC ATAATTTTTCTAAATTACCCGGGATTGAGCACACGGAAAAATATGACCTTCACTTTCCGCGCTACTTCTACGCAGTCCCT AAAAAGTACTTCTATCCTTTAACCGGCATGTCATATTCTTATTTTGTTTCCGGATATGCTATGAAAAACATAAATCCGAA ACCGGAGCTGATTCATGCACACTTCTCATACCCTGATGGGTACGGAATGATGAAACTCGCAAAGAAATGGGAAGTTCCTC TTGTAATCAGCGCCCTTGGCACTATAGAAAGAAAAGTTGCCTATGAAGGTTCCTATACTTCAAAACAGATTATAGAAGCC ATGAATTTTGCCGACAGGATACTTTCTGTCAGTGAGGACCTCAAAACCCACATAGTAAACCTCGGGATAGACGAAAATAA AGTAGATGTGGTTCCTAACGGCGTGGATACGGAAATATTCAGACCGGCAGGAAAAGAATATGCAAGAAATGTTTTAAACC TGCCTCAGGAAAAAAAGATTGTCCTGTTTATAGGAGCCCTGAGGAAAATAAAAGGTGTGGATTATCTTATTGAAGCTGCA AAAAGTTTTGTGAATAAAAACACAGACCTCTACATGGTAGGCAGGGATGATGGGCTTAGAAAAAGCCTGGAGAAAAGGGC AGAAGAACTTAAAATCTCCGGCTTTATCAAATTTACAGGGCCAGTAACCCATGAAGAGATTCCCCTCTGGATTTCAGCAG CTGATATGCTGGTTTTACCTTCCCTTTCAGAAGGGAGACCAAATGTTGTTCTTGAAGCTCTTTCCTGTGAAGTCCCTGTA GTGGCGACTGACGTTGGCGGAATCCCGGAACTGATGGTTGAAGGGGAAACAGGCTATCTGGTACCTTCTAAAAACCCTGT ACAGCTATCAGAGAAAATAAACAAATTACTTGAAAACGAAAGCAGAAGAGAAAAGATGGGAAAATTCGGCCGCAAAAGCA TAATCCAGAGAGGACTTACCTGGGAATCTCATGCAAAGAAAACTGTAGATATATATTCAGAACTCCTCGCAAGATCCTCA AAATGA
Upstream 100 bases:
>100_bases AAAAAAGAAAAGATATGCGTTCCACAGAGAGATATTTATAGGAGAAATTCTCTCCTTTGTGTGTTTTTGAGGCATCCAAA TAGAAAAAAGGAAAAGAATT
Downstream 100 bases:
>100_bases ATTTACCGGAAAATTAAAGACAAAGTACAGATTTGCCCAAAAGCTCTCTCCACATACTAATATAACATCTGAGCTGTCCC TTTAGCTCAGACAAAGCTCC
Product: glycosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MRVLEVCQEFPNRYYPQLGTFIKQSIDSIANQGVELTVISPKAFVLPFSAFPYHNFSKLPGIEHTEKYDLHFPRYFYAVP KKYFYPLTGMSYSYFVSGYAMKNINPKPELIHAHFSYPDGYGMMKLAKKWEVPLVISALGTIERKVAYEGSYTSKQIIEA MNFADRILSVSEDLKTHIVNLGIDENKVDVVPNGVDTEIFRPAGKEYARNVLNLPQEKKIVLFIGALRKIKGVDYLIEAA KSFVNKNTDLYMVGRDDGLRKSLEKRAEELKISGFIKFTGPVTHEEIPLWISAADMLVLPSLSEGRPNVVLEALSCEVPV VATDVGGIPELMVEGETGYLVPSKNPVQLSEKINKLLENESRREKMGKFGRKSIIQRGLTWESHAKKTVDIYSELLARSS K
Sequences:
>Translated_401_residues MRVLEVCQEFPNRYYPQLGTFIKQSIDSIANQGVELTVISPKAFVLPFSAFPYHNFSKLPGIEHTEKYDLHFPRYFYAVP KKYFYPLTGMSYSYFVSGYAMKNINPKPELIHAHFSYPDGYGMMKLAKKWEVPLVISALGTIERKVAYEGSYTSKQIIEA MNFADRILSVSEDLKTHIVNLGIDENKVDVVPNGVDTEIFRPAGKEYARNVLNLPQEKKIVLFIGALRKIKGVDYLIEAA KSFVNKNTDLYMVGRDDGLRKSLEKRAEELKISGFIKFTGPVTHEEIPLWISAADMLVLPSLSEGRPNVVLEALSCEVPV VATDVGGIPELMVEGETGYLVPSKNPVQLSEKINKLLENESRREKMGKFGRKSIIQRGLTWESHAKKTVDIYSELLARSS K >Mature_401_residues MRVLEVCQEFPNRYYPQLGTFIKQSIDSIANQGVELTVISPKAFVLPFSAFPYHNFSKLPGIEHTEKYDLHFPRYFYAVP KKYFYPLTGMSYSYFVSGYAMKNINPKPELIHAHFSYPDGYGMMKLAKKWEVPLVISALGTIERKVAYEGSYTSKQIIEA MNFADRILSVSEDLKTHIVNLGIDENKVDVVPNGVDTEIFRPAGKEYARNVLNLPQEKKIVLFIGALRKIKGVDYLIEAA KSFVNKNTDLYMVGRDDGLRKSLEKRAEELKISGFIKFTGPVTHEEIPLWISAADMLVLPSLSEGRPNVVLEALSCEVPV VATDVGGIPELMVEGETGYLVPSKNPVQLSEKINKLLENESRREKMGKFGRKSIIQRGLTWESHAKKTVDIYSELLARSS K
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Caenorhabditis elegans, GI17532709, Length=236, Percent_Identity=27.1186440677966, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI9755344, Length=255, Percent_Identity=25.0980392156863, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24654571, Length=152, Percent_Identity=29.6052631578947, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 45316; Mature: 45316
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLEVCQEFPNRYYPQLGTFIKQSIDSIANQGVELTVISPKAFVLPFSAFPYHNFSKLP CCHHHHHHHCCHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCHHHCC GIEHTEKYDLHFPRYFYAVPKKYFYPLTGMSYSYFVSGYAMKNINPKPELIHAHFSYPDG CCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCHHHHEECEEECCCCCCCCEEEEEECCCCC YGMMKLAKKWEVPLVISALGTIERKVAYEGSYTSKQIIEAMNFADRILSVSEDLKTHIVN CCHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE LGIDENKVDVVPNGVDTEIFRPAGKEYARNVLNLPQEKKIVLFIGALRKIKGVDYLIEAA CCCCCCCEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHCCHHHHHHHH KSFVNKNTDLYMVGRDDGLRKSLEKRAEELKISGFIKFTGPVTHEEIPLWISAADMLVLP HHHHCCCCCEEEEECCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCEEEEECCEEEEC SLSEGRPNVVLEALSCEVPVVATDVGGIPELMVEGETGYLVPSKNPVQLSEKINKLLENE CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHCH SRREKMGKFGRKSIIQRGLTWESHAKKTVDIYSELLARSSK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVLEVCQEFPNRYYPQLGTFIKQSIDSIANQGVELTVISPKAFVLPFSAFPYHNFSKLP CCHHHHHHHCCHHHCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCHHHCC GIEHTEKYDLHFPRYFYAVPKKYFYPLTGMSYSYFVSGYAMKNINPKPELIHAHFSYPDG CCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCHHHHEECEEECCCCCCCCEEEEEECCCCC YGMMKLAKKWEVPLVISALGTIERKVAYEGSYTSKQIIEAMNFADRILSVSEDLKTHIVN CCHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE LGIDENKVDVVPNGVDTEIFRPAGKEYARNVLNLPQEKKIVLFIGALRKIKGVDYLIEAA CCCCCCCEEECCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHCCHHHHHHHH KSFVNKNTDLYMVGRDDGLRKSLEKRAEELKISGFIKFTGPVTHEEIPLWISAADMLVLP HHHHCCCCCEEEEECCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCEEEEECCEEEEC SLSEGRPNVVLEALSCEVPVVATDVGGIPELMVEGETGYLVPSKNPVQLSEKINKLLENE CCCCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHCH SRREKMGKFGRKSIIQRGLTWESHAKKTVDIYSELLARSSK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA