| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is epsE [H]
Identifier: 21227243
GI number: 21227243
Start: 1350918
End: 1351853
Strand: Direct
Name: epsE [H]
Synonym: MM_1141
Alternate gene names: 21227243
Gene position: 1350918-1351853 (Clockwise)
Preceding gene: 21227240
Following gene: 21227244
Centisome position: 32.98
GC content: 34.72
Gene sequence:
>936_bases ATGAAAAAAGATCTTATTAGCGTTGTAATGTCTGCATACAATTCTGAAAAATTTATCTCGGACTCGATTTCGAGTATTTT AGATCAAACCTATGAAAATTGGGAGCTTATAATTATAAATGATGCCTCTTCGGACAATACGCTGAAGATAGTTAATCAAT TTTCAGAAAAAGACCCCAGAATTAAAGTAATTGATAATGAAAATAATCTTGGTTTAACAATTTCTCTTAATATTGGGATA AACAATTCTAAAGGGGAGTTTATTGCAAGGCTGGACTCGGATGACTTTGCAGAGCCTTCAAGATTGGAAAAAGAGCTTGA TCATTTGCATGCTTATCCAGAAGCGGGGCTGGTAGGATCAGGAGCACATCTGATTAATAGTTCCGGAAATAAAATTGGCT CTATGAATGTAATGTCACAACCATACTTTGTAAATAGATTTCTTATCAATCTTAATCCTTTTATTCATAGTTCTATAATG GTCAGAAAGAAAGCCCTGGATAATGTGGGATCCTATAGAGAAAAATTTCGATACTCACAGGACTATGATCTTATTTTAAG GCTCAGTGATAAATATAAATTATCCAACATCGCACTACCTTTAATTAGATGGAGAGTTTCCGATAGCAGTGTAACTATGC AACACCACACCCTTCAACGAATATATGCAGATATCGCCAGAGAGTTCGCAATTGAAAGAAGAAACTCTGGTCATGATAGT TATGAGTCTACCGAGTTCGATACTTTGATTCATGAAATGAGAATAAGAAATCAGGGCAGGTATCTGTGTGACCATGGTGT TTATGACCTGTTGTTTAATAAGAAATATAAAGAAGGGTGTTCGGAATTAATAAAAGGGATCTCAAAAGGCGGATTTCCAT ATAATTCGTTTTATAGAGGGATCACGCAAGTAATATCTAAAGTGAATATCCAGTAA
Upstream 100 bases:
>100_bases ATTGCTAAAATTTTAAACTAGAATTTTTAAATATCTAAAATAATATAGTAAAGAGTGTAATCGGAAATCATCTAAAAAAC TGTTTACGGTTGTTTTCTCA
Downstream 100 bases:
>100_bases TCACATTTTGAGAAAAACACTTTCCGAGACAAAAATATGTTATTTTATGGAATTAAAACGATCTTTTTTCACTTAATAAT ATAGGACAAAAATTATGAAA
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPRIKVIDNENNLGLTISLNIGI NNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGSGAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIM VRKKALDNVGSYREKFRYSQDYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRGITQVISKVNIQ
Sequences:
>Translated_311_residues MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPRIKVIDNENNLGLTISLNIGI NNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGSGAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIM VRKKALDNVGSYREKFRYSQDYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRGITQVISKVNIQ >Mature_311_residues MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPRIKVIDNENNLGLTISLNIGI NNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGSGAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIM VRKKALDNVGSYREKFRYSQDYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRGITQVISKVNIQ
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788372, Length=199, Percent_Identity=29.1457286432161, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787259, Length=132, Percent_Identity=28.7878787878788, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790044, Length=144, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 35655; Mature: 35655
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCC IKVIDNENNLGLTISLNIGINNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGS EEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC GAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIMVRKKALDNVGSYREKFRYSQ CHHEECCCCCCEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS CCEEEEEECCCEEHHHEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRG CCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH ITQVISKVNIQ HHHHHHHCCCC >Mature Secondary Structure MKKDLISVVMSAYNSEKFISDSISSILDQTYENWELIIINDASSDNTLKIVNQFSEKDPR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCC IKVIDNENNLGLTISLNIGINNSKGEFIARLDSDDFAEPSRLEKELDHLHAYPEAGLVGS EEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC GAHLINSSGNKIGSMNVMSQPYFVNRFLINLNPFIHSSIMVRKKALDNVGSYREKFRYSQ CHHEECCCCCCEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DYDLILRLSDKYKLSNIALPLIRWRVSDSSVTMQHHTLQRIYADIAREFAIERRNSGHDS CCEEEEEECCCEEHHHEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC YESTEFDTLIHEMRIRNQGRYLCDHGVYDLLFNKKYKEGCSELIKGISKGGFPYNSFYRG CCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHH ITQVISKVNIQ HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]