| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227226
Identifier: 21227226
GI number: 21227226
Start: 1326888
End: 1328345
Strand: Direct
Name: 21227226
Synonym: MM_1124
Alternate gene names: NA
Gene position: 1326888-1328345 (Clockwise)
Preceding gene: 21227225
Following gene: 21227234
Centisome position: 32.39
GC content: 39.92
Gene sequence:
>1458_bases ATGTCAAACTTTATTACTAACGTACTGAAACTGGTATCAGGTAGTGTTACTGCACAGATCCTGGGCATACTTCTCATACC TATAATCACAAGAATTTATAACCCGGATGATTTTGGAATTTTTCAGCTCTTCATATCAATATCAGGCATACTTGTAATAG TTTCTACTTTTTCGTATCAGCTGGCTATAATGTTGCCCAAAACAGAGGAAGACGCTGCAAATATTACCTCTGTGTGCGTC GTACTGGTGACTCTCATATCCATACTTACAGGCGTTGTGGTCTTATTTATCCCGGAAGACATCAATATTTTTAATACTCC TGGGATTTCGAAATATCTTCCTCTCCTGCCAGTGATAATATTCCTCAATGGGATGTTTTTTGTACAAAACTACTGGCTTT CAAGAAAAACCCGGTTTGGGGTTATTGCAGGGTCCAGAGTTTCAAACACCCTGACCTCAAAAATATCTCAAATAGGACTT GCAAAAATGAGTGTCACTCCATTCGGCCTGATAGGAGGATACATTGCAGGATATGCATTTGCAGACATTGTCATGCTGAA AGGTGTTAAAAAAGACATTCAGATTTTCAAAAAGGTATCAGTAAAAAGAATGAAAGAGGTAGCCATCCAGTATAAGAAAT TCCCATTATTCAGCTTCTGGTCATCTATCGCGAACACCATATCCCCACAGGTCCCTGCCTTTCTGCTCGCATACTTTTAC AGCACTGCGGTAGTAGGGCATTTCTCACTTGCAAATCAGGTTGTAAACCTGCCAATGGGAATTGTCGGCGGCGCTATAGG GCAGGTTTTTTTCCAGAAAGTGAGCGAGGTTAAAAACGGGAATGGAGAAGGAGATATGAAAGTCATAGTTGGCGAAGTAT ATAACAAACTGATTTCAATAGGTCTCTTCCCCATGATACTCCTGGTTATTCTTGGAGAGCAGATATTCACTTTTGCTTTC GGAGAAGAGTGGGGCATTTCAGGGACATATGTGAGAATCCTTGTACCCTGGATATTTCTTGTCTTTCTGTCTTCGCCTAT TACAACCCTCTATAACGTATTTGAAAAACAGAAAGTCTGGCTCATTTTCAGCATGTCTCTCCTTGTCTCAAGAGTGGTGG CGCTGGTTATCGGAGGAAGGTATGGGAGTCCTGAGTTTGCTCTTGCCCTGTATAGTTTTACGGGAATTGTGTTCTGGCTA TGGAACAATGCATACCTCCTGGGGCTTGCAGGAATTAGTAAGAAAGAGAGTTTAGAAGTGCTTATAAAATATGCAATAAT AGGCTTTGCAGTTTCTATCCCTCTAATTCTGGTAGAACTGATTTCTTCGAGCTTTTATGTAATAATAATTACAGCTGTTA TCACAACGGTCATGTATTATGCGATAACCCTTCACGAAGACCCTATGTTCAAAAAAATGTTCTCATCTTTTCTTATAAAA GTAAAAAATAGAAGCTAA
Upstream 100 bases:
>100_bases CTAGATAAGAATTCATTGGAAACTATTATATAAATCGCCTGAGTGAAAGCTCTTATCCATGACCGGAACTGGTTTAATAT ATAAAAAAGGTTGAAACCCC
Downstream 100 bases:
>100_bases GATGAGAATTGTATTTTTCTGAAAAATAAGCTCAGGTAGAAGCTATCATTTAAAGGGCTTCTACAAATTTTTAATAAATC AGATCAGGGAAAAGAGCCTG
Product: O-antigen translocase
Products: NA
Alternate protein names: O-Antigen Translocase; PorS Protein; O-Antigen And Teichoic Acid-Like Export Protein; RfbX Family O-Antigen/Teichoic Acid Export Protein; WzxA Protein; Polysacharide Biosyntheis Protein; O-Antigen Flippase Wzx
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MSNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQLAIMLPKTEEDAANITSVCV VLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVIIFLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGL AKMSVTPFGLIGGYIAGYAFADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISIGLFPMILLVILGEQIFTFAF GEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVWLIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWL WNNAYLLGLAGISKKESLEVLIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK VKNRS
Sequences:
>Translated_485_residues MSNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQLAIMLPKTEEDAANITSVCV VLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVIIFLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGL AKMSVTPFGLIGGYIAGYAFADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISIGLFPMILLVILGEQIFTFAF GEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVWLIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWL WNNAYLLGLAGISKKESLEVLIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK VKNRS >Mature_484_residues SNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQLAIMLPKTEEDAANITSVCVV LVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVIIFLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGLA KMSVTPFGLIGGYIAGYAFADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFYS TAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISIGLFPMILLVILGEQIFTFAFG EEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVWLIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWLW NNAYLLGLAGISKKESLEVLIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIKV KNRS
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53702; Mature: 53571
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQ CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEE LAIMLPKTEEDAANITSVCVVLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVII EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHH FLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGLAKMSVTPFGLIGGYIAGYAF HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHH ADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHH GLFPMILLVILGEQIFTFAFGEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVW HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHH LIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWLWNNAYLLGLAGISKKESLEV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHH LIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VKNRS CCCCC >Mature Secondary Structure SNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQ CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEE LAIMLPKTEEDAANITSVCVVLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVII EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHH FLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGLAKMSVTPFGLIGGYIAGYAF HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHH ADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHH GLFPMILLVILGEQIFTFAFGEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVW HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHH LIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWLWNNAYLLGLAGISKKESLEV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHH LIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VKNRS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA