Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227226

Identifier: 21227226

GI number: 21227226

Start: 1326888

End: 1328345

Strand: Direct

Name: 21227226

Synonym: MM_1124

Alternate gene names: NA

Gene position: 1326888-1328345 (Clockwise)

Preceding gene: 21227225

Following gene: 21227234

Centisome position: 32.39

GC content: 39.92

Gene sequence:

>1458_bases
ATGTCAAACTTTATTACTAACGTACTGAAACTGGTATCAGGTAGTGTTACTGCACAGATCCTGGGCATACTTCTCATACC
TATAATCACAAGAATTTATAACCCGGATGATTTTGGAATTTTTCAGCTCTTCATATCAATATCAGGCATACTTGTAATAG
TTTCTACTTTTTCGTATCAGCTGGCTATAATGTTGCCCAAAACAGAGGAAGACGCTGCAAATATTACCTCTGTGTGCGTC
GTACTGGTGACTCTCATATCCATACTTACAGGCGTTGTGGTCTTATTTATCCCGGAAGACATCAATATTTTTAATACTCC
TGGGATTTCGAAATATCTTCCTCTCCTGCCAGTGATAATATTCCTCAATGGGATGTTTTTTGTACAAAACTACTGGCTTT
CAAGAAAAACCCGGTTTGGGGTTATTGCAGGGTCCAGAGTTTCAAACACCCTGACCTCAAAAATATCTCAAATAGGACTT
GCAAAAATGAGTGTCACTCCATTCGGCCTGATAGGAGGATACATTGCAGGATATGCATTTGCAGACATTGTCATGCTGAA
AGGTGTTAAAAAAGACATTCAGATTTTCAAAAAGGTATCAGTAAAAAGAATGAAAGAGGTAGCCATCCAGTATAAGAAAT
TCCCATTATTCAGCTTCTGGTCATCTATCGCGAACACCATATCCCCACAGGTCCCTGCCTTTCTGCTCGCATACTTTTAC
AGCACTGCGGTAGTAGGGCATTTCTCACTTGCAAATCAGGTTGTAAACCTGCCAATGGGAATTGTCGGCGGCGCTATAGG
GCAGGTTTTTTTCCAGAAAGTGAGCGAGGTTAAAAACGGGAATGGAGAAGGAGATATGAAAGTCATAGTTGGCGAAGTAT
ATAACAAACTGATTTCAATAGGTCTCTTCCCCATGATACTCCTGGTTATTCTTGGAGAGCAGATATTCACTTTTGCTTTC
GGAGAAGAGTGGGGCATTTCAGGGACATATGTGAGAATCCTTGTACCCTGGATATTTCTTGTCTTTCTGTCTTCGCCTAT
TACAACCCTCTATAACGTATTTGAAAAACAGAAAGTCTGGCTCATTTTCAGCATGTCTCTCCTTGTCTCAAGAGTGGTGG
CGCTGGTTATCGGAGGAAGGTATGGGAGTCCTGAGTTTGCTCTTGCCCTGTATAGTTTTACGGGAATTGTGTTCTGGCTA
TGGAACAATGCATACCTCCTGGGGCTTGCAGGAATTAGTAAGAAAGAGAGTTTAGAAGTGCTTATAAAATATGCAATAAT
AGGCTTTGCAGTTTCTATCCCTCTAATTCTGGTAGAACTGATTTCTTCGAGCTTTTATGTAATAATAATTACAGCTGTTA
TCACAACGGTCATGTATTATGCGATAACCCTTCACGAAGACCCTATGTTCAAAAAAATGTTCTCATCTTTTCTTATAAAA
GTAAAAAATAGAAGCTAA

Upstream 100 bases:

>100_bases
CTAGATAAGAATTCATTGGAAACTATTATATAAATCGCCTGAGTGAAAGCTCTTATCCATGACCGGAACTGGTTTAATAT
ATAAAAAAGGTTGAAACCCC

Downstream 100 bases:

>100_bases
GATGAGAATTGTATTTTTCTGAAAAATAAGCTCAGGTAGAAGCTATCATTTAAAGGGCTTCTACAAATTTTTAATAAATC
AGATCAGGGAAAAGAGCCTG

Product: O-antigen translocase

Products: NA

Alternate protein names: O-Antigen Translocase; PorS Protein; O-Antigen And Teichoic Acid-Like Export Protein; RfbX Family O-Antigen/Teichoic Acid Export Protein; WzxA Protein; Polysacharide Biosyntheis Protein; O-Antigen Flippase Wzx

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQLAIMLPKTEEDAANITSVCV
VLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVIIFLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGL
AKMSVTPFGLIGGYIAGYAFADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY
STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISIGLFPMILLVILGEQIFTFAF
GEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVWLIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWL
WNNAYLLGLAGISKKESLEVLIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK
VKNRS

Sequences:

>Translated_485_residues
MSNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQLAIMLPKTEEDAANITSVCV
VLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVIIFLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGL
AKMSVTPFGLIGGYIAGYAFADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY
STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISIGLFPMILLVILGEQIFTFAF
GEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVWLIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWL
WNNAYLLGLAGISKKESLEVLIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK
VKNRS
>Mature_484_residues
SNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQLAIMLPKTEEDAANITSVCVV
LVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVIIFLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGLA
KMSVTPFGLIGGYIAGYAFADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFYS
TAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISIGLFPMILLVILGEQIFTFAFG
EEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVWLIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWLW
NNAYLLGLAGISKKESLEVLIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIKV
KNRS

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53702; Mature: 53571

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQ
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEE
LAIMLPKTEEDAANITSVCVVLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVII
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHH
FLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGLAKMSVTPFGLIGGYIAGYAF
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHH
ADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHH
GLFPMILLVILGEQIFTFAFGEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHH
LIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWLWNNAYLLGLAGISKKESLEV
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHH
LIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VKNRS
CCCCC
>Mature Secondary Structure 
SNFITNVLKLVSGSVTAQILGILLIPIITRIYNPDDFGIFQLFISISGILVIVSTFSYQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEE
LAIMLPKTEEDAANITSVCVVLVTLISILTGVVVLFIPEDINIFNTPGISKYLPLLPVII
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHH
FLNGMFFVQNYWLSRKTRFGVIAGSRVSNTLTSKISQIGLAKMSVTPFGLIGGYIAGYAF
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHH
ADIVMLKGVKKDIQIFKKVSVKRMKEVAIQYKKFPLFSFWSSIANTISPQVPAFLLAYFY
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHH
STAVVGHFSLANQVVNLPMGIVGGAIGQVFFQKVSEVKNGNGEGDMKVIVGEVYNKLISI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHH
GLFPMILLVILGEQIFTFAFGEEWGISGTYVRILVPWIFLVFLSSPITTLYNVFEKQKVW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHH
LIFSMSLLVSRVVALVIGGRYGSPEFALALYSFTGIVFWLWNNAYLLGLAGISKKESLEV
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCCHHHHHH
LIKYAIIGFAVSIPLILVELISSSFYVIIITAVITTVMYYAITLHEDPMFKKMFSSFLIK
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VKNRS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA