Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227225

Identifier: 21227225

GI number: 21227225

Start: 1324827

End: 1326770

Strand: Direct

Name: 21227225

Synonym: MM_1123

Alternate gene names: NA

Gene position: 1324827-1326770 (Clockwise)

Preceding gene: 21227224

Following gene: 21227226

Centisome position: 32.34

GC content: 40.12

Gene sequence:

>1944_bases
GTGGGTCATATGGAAATTGTAAAAAAGTGTAAAGAGACATTTACCGGGAATCTTGACATGATTCTCAGCTTCATGGGATT
TAGCCTGGGCCTGTTCATTGTTTCATTATATTACCTTATCAATTTAAACCAGCAAGACATTGGACTTGCTGTTCTTTTTG
CCTGCTTAATCTATTACGTTTTCAGAAAAAAATTTAAAAACGAAGCCCCTATTTCCCCGGGAAAAGATGAATTAAAGAGC
GCACTTAATCTATCCTTTTACTTCGTATTTCTGATAAGCATTTTGATTTATAGCATGCACCTTTATTACAGGCCGTTATC
TTACTTTATACTTTTATGCGTACTTGCAGGGATCATAGCCTCGGAAATTCTCTATGTAAAGAAAGGAGACCGAGTAGCTC
CCATCCTGCTGCAAATATTCCTCCTTTCAATCCTCATAAGGTCCGGAATTTATTATAATTTTCCAAGCCTTATGGGTTAT
GATGCTTATGCTCATGCCGGAATAGCAAAATTGATCACAGAGACAGGAACCGTTCCTCCAATTGAAATCAGCAGTAAATA
TTTTTATTACCCACTTGCCCATATTTTTGTCTCCATGACTCAGCTGATGGGCGGGCTGGACGTCAAAGATGGATTCTTTT
ATTCCATAGGTTTTGCTAATATCTTTATCACGGCTGGGATTTACCTTATAGGAAAAAAACTTGAAGGCCCCCAGATGGGG
TTACTTGCTGCTTTGTTGATAAACCTTAATAACCACAATATTGTCACCGGAATTACCAACATAACACCGGGTTCCCTGGT
CCTATGCTACTTTATAATCATTCTCTACGCGGTCTTCAGCGAAAAGCCTGGTCTGGTTCAGGCAGGTCTTCTTCTTCTGG
CTACAATCCTGATGGTGCTGACCCACCAGCTGACAACATTTGTTGTTTTTCTGGCTATGATCTCGATTCTGGCGGGAAAA
TATCTGCATAACCTTCTTTATGGCAGTTTGCCCACCGCATCAGGCAGCTTCAATTACATACTTTTTTTTGTAATCAGTCT
GCAGACCTACTGGATGTTTACATATGTCACTCGGGATACTTCTTTTTTTGAAATGATCTTCAAACCTCTTGTAGAAGTGC
TCCAGTCCGGATCCAGCTACTCAAGTGATGAGCTTATCGTAGGAAGCGCGACCAGCCAGAGCTCAATGGAAGTACTGATA
CTTCATATAAGCTACCTTGCCCTGCCTTTCTTTGCGATAGGAGGAGTTCTAACCTGGTTTTCCCGCAGGGACGCCGAAAA
AATAAATAAATTTTCAATTGCCCTTGTTGTTGCAATTTTATATGGTTTAGCCTATGGGATTCCTTTGCTTGGCATGAGAA
ATTTCCTTACAAGCAGGTGGTTCCCATTGATAGCAGTATTTCTGGTACTTGTGTCTGCATCATATATGCTAAAACTTGTG
AGCCTGTTCAGCTCCAGAAAAGCAAAAGTTTCTGCGGTATTTGCCATAATGCTGTTATTTTCATTTGTAATGATAACAAC
ACCGGGAATAAATAAAGACAACCCTCTTGTAGGAAAAGATACAACTGTAAGAAACCAGTTCAAGAATATTGAGATCCAGG
CTGTGAAAACTCTAACTGGAATGTATTCTGGAGGCATCTTGATGGACTCTCCCTATGATAGCTGCCTTTTTTACAGGGAC
CCTGGATATGATGTAAATAACGCAACATATTTCGATACTGAGCAGATAGAGTCAAAAGAAATAAGTGGCGACCATATGAT
ACTGCTTAGAAGATCGTCCCTTGGTGAACCAGTATCCATAAATGATCCGGAAAGATACGGAGTAAATATAATCAGGCCAT
TACCTGCAGAGTTCTTTAACAGTTTCGATGCTCCGGAATATGAACTTGTATATGACAACGCAGAAGTACTGGCTTACCTT
AAAAAGAGCAAAGAAGCAAACTAA

Upstream 100 bases:

>100_bases
GAAAGAAAAAAAGAATGTGCAACCTGATAAACAGGGGACGTCGGGTTACAAAAATTCTTCATCGGGAAACTATATAATCT
CAAAGAAAGTTTAGTGTGTA

Downstream 100 bases:

>100_bases
TAAGAATTTATTGGACACTAGATAAGAATTCATTGGAAACTATTATATAAATCGCCTGAGTGAAAGCTCTTATCCATGAC
CGGAACTGGTTTAATATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MGHMEIVKKCKETFTGNLDMILSFMGFSLGLFIVSLYYLINLNQQDIGLAVLFACLIYYVFRKKFKNEAPISPGKDELKS
ALNLSFYFVFLISILIYSMHLYYRPLSYFILLCVLAGIIASEILYVKKGDRVAPILLQIFLLSILIRSGIYYNFPSLMGY
DAYAHAGIAKLITETGTVPPIEISSKYFYYPLAHIFVSMTQLMGGLDVKDGFFYSIGFANIFITAGIYLIGKKLEGPQMG
LLAALLINLNNHNIVTGITNITPGSLVLCYFIIILYAVFSEKPGLVQAGLLLLATILMVLTHQLTTFVVFLAMISILAGK
YLHNLLYGSLPTASGSFNYILFFVISLQTYWMFTYVTRDTSFFEMIFKPLVEVLQSGSSYSSDELIVGSATSQSSMEVLI
LHISYLALPFFAIGGVLTWFSRRDAEKINKFSIALVVAILYGLAYGIPLLGMRNFLTSRWFPLIAVFLVLVSASYMLKLV
SLFSSRKAKVSAVFAIMLLFSFVMITTPGINKDNPLVGKDTTVRNQFKNIEIQAVKTLTGMYSGGILMDSPYDSCLFYRD
PGYDVNNATYFDTEQIESKEISGDHMILLRRSSLGEPVSINDPERYGVNIIRPLPAEFFNSFDAPEYELVYDNAEVLAYL
KKSKEAN

Sequences:

>Translated_647_residues
MGHMEIVKKCKETFTGNLDMILSFMGFSLGLFIVSLYYLINLNQQDIGLAVLFACLIYYVFRKKFKNEAPISPGKDELKS
ALNLSFYFVFLISILIYSMHLYYRPLSYFILLCVLAGIIASEILYVKKGDRVAPILLQIFLLSILIRSGIYYNFPSLMGY
DAYAHAGIAKLITETGTVPPIEISSKYFYYPLAHIFVSMTQLMGGLDVKDGFFYSIGFANIFITAGIYLIGKKLEGPQMG
LLAALLINLNNHNIVTGITNITPGSLVLCYFIIILYAVFSEKPGLVQAGLLLLATILMVLTHQLTTFVVFLAMISILAGK
YLHNLLYGSLPTASGSFNYILFFVISLQTYWMFTYVTRDTSFFEMIFKPLVEVLQSGSSYSSDELIVGSATSQSSMEVLI
LHISYLALPFFAIGGVLTWFSRRDAEKINKFSIALVVAILYGLAYGIPLLGMRNFLTSRWFPLIAVFLVLVSASYMLKLV
SLFSSRKAKVSAVFAIMLLFSFVMITTPGINKDNPLVGKDTTVRNQFKNIEIQAVKTLTGMYSGGILMDSPYDSCLFYRD
PGYDVNNATYFDTEQIESKEISGDHMILLRRSSLGEPVSINDPERYGVNIIRPLPAEFFNSFDAPEYELVYDNAEVLAYL
KKSKEAN
>Mature_646_residues
GHMEIVKKCKETFTGNLDMILSFMGFSLGLFIVSLYYLINLNQQDIGLAVLFACLIYYVFRKKFKNEAPISPGKDELKSA
LNLSFYFVFLISILIYSMHLYYRPLSYFILLCVLAGIIASEILYVKKGDRVAPILLQIFLLSILIRSGIYYNFPSLMGYD
AYAHAGIAKLITETGTVPPIEISSKYFYYPLAHIFVSMTQLMGGLDVKDGFFYSIGFANIFITAGIYLIGKKLEGPQMGL
LAALLINLNNHNIVTGITNITPGSLVLCYFIIILYAVFSEKPGLVQAGLLLLATILMVLTHQLTTFVVFLAMISILAGKY
LHNLLYGSLPTASGSFNYILFFVISLQTYWMFTYVTRDTSFFEMIFKPLVEVLQSGSSYSSDELIVGSATSQSSMEVLIL
HISYLALPFFAIGGVLTWFSRRDAEKINKFSIALVVAILYGLAYGIPLLGMRNFLTSRWFPLIAVFLVLVSASYMLKLVS
LFSSRKAKVSAVFAIMLLFSFVMITTPGINKDNPLVGKDTTVRNQFKNIEIQAVKTLTGMYSGGILMDSPYDSCLFYRDP
GYDVNNATYFDTEQIESKEISGDHMILLRRSSLGEPVSINDPERYGVNIIRPLPAEFFNSFDAPEYELVYDNAEVLAYLK
KSKEAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72485; Mature: 72354

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHMEIVKKCKETFTGNLDMILSFMGFSLGLFIVSLYYLINLNQQDIGLAVLFACLIYYV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FRKKFKNEAPISPGKDELKSALNLSFYFVFLISILIYSMHLYYRPLSYFILLCVLAGIIA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEILYVKKGDRVAPILLQIFLLSILIRSGIYYNFPSLMGYDAYAHAGIAKLITETGTVPP
HHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCC
IEISSKYFYYPLAHIFVSMTQLMGGLDVKDGFFYSIGFANIFITAGIYLIGKKLEGPQMG
CEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCCCHHH
LLAALLINLNNHNIVTGITNITPGSLVLCYFIIILYAVFSEKPGLVQAGLLLLATILMVL
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
THQLTTFVVFLAMISILAGKYLHNLLYGSLPTASGSFNYILFFVISLQTYWMFTYVTRDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCH
SFFEMIFKPLVEVLQSGSSYSSDELIVGSATSQSSMEVLILHISYLALPFFAIGGVLTWF
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRRDAEKINKFSIALVVAILYGLAYGIPLLGMRNFLTSRWFPLIAVFLVLVSASYMLKLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFSSRKAKVSAVFAIMLLFSFVMITTPGINKDNPLVGKDTTVRNQFKNIEIQAVKTLTG
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
MYSGGILMDSPYDSCLFYRDPGYDVNNATYFDTEQIESKEISGDHMILLRRSSLGEPVSI
HHCCCEEECCCCCCEEEEECCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCCCCCCCC
NDPERYGVNIIRPLPAEFFNSFDAPEYELVYDNAEVLAYLKKSKEAN
CCCHHHCCEEECCCCHHHCCCCCCCCEEEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GHMEIVKKCKETFTGNLDMILSFMGFSLGLFIVSLYYLINLNQQDIGLAVLFACLIYYV
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FRKKFKNEAPISPGKDELKSALNLSFYFVFLISILIYSMHLYYRPLSYFILLCVLAGIIA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEILYVKKGDRVAPILLQIFLLSILIRSGIYYNFPSLMGYDAYAHAGIAKLITETGTVPP
HHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCC
IEISSKYFYYPLAHIFVSMTQLMGGLDVKDGFFYSIGFANIFITAGIYLIGKKLEGPQMG
CEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHEECCCCCCHHH
LLAALLINLNNHNIVTGITNITPGSLVLCYFIIILYAVFSEKPGLVQAGLLLLATILMVL
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
THQLTTFVVFLAMISILAGKYLHNLLYGSLPTASGSFNYILFFVISLQTYWMFTYVTRDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCH
SFFEMIFKPLVEVLQSGSSYSSDELIVGSATSQSSMEVLILHISYLALPFFAIGGVLTWF
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SRRDAEKINKFSIALVVAILYGLAYGIPLLGMRNFLTSRWFPLIAVFLVLVSASYMLKLV
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLFSSRKAKVSAVFAIMLLFSFVMITTPGINKDNPLVGKDTTVRNQFKNIEIQAVKTLTG
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
MYSGGILMDSPYDSCLFYRDPGYDVNNATYFDTEQIESKEISGDHMILLRRSSLGEPVSI
HHCCCEEECCCCCCEEEEECCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCCCCCCCC
NDPERYGVNIIRPLPAEFFNSFDAPEYELVYDNAEVLAYLKKSKEAN
CCCHHHCCEEECCCCHHHCCCCCCCCEEEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA