| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227220
Identifier: 21227220
GI number: 21227220
Start: 1313567
End: 1315489
Strand: Direct
Name: 21227220
Synonym: MM_1118
Alternate gene names: NA
Gene position: 1313567-1315489 (Clockwise)
Preceding gene: 21227217
Following gene: 21227221
Centisome position: 32.07
GC content: 44.72
Gene sequence:
>1923_bases TTGAATCCACTCAAATTCCAATCCCAACCCAAAGGTGATACGATGCTAAAAAGACAGATAGGAACCCTATTCCTAATAAC GTGCCTTATTTTAACAGCCGTACCCGCTGCGTTAGGCGCACAGAATACAGTAACTGTAAATCCTGCATCTGGCTCAGATG CCCAGACTGCAATTAATAACGCAATAAACTCCGTAGCAGCAGGAGCAACATCAAGCAACCCGGGAGTGGTTATTCTCGGT GCTGGCACTTATAAGATAAGTGCACCTATAATTTTGAAATCCAATGTAGTACTGAAAGGTGCGGGCGACAATACAATAAT CTTTGCTACCGGCTCAGTCTGTAACTCAGATGGATCACCTGCCTACATATACGGATCAGGTGTTTCTAACGTAGAAGTAT CTCATCTTCAGTTCCAGAGTACAGCAACAGGACCTAAAGATGGAGGGCACGGAGACTACCGGAACTGCATAAAATTGACG TCTGTAACCAATGCTAAGGTACATGATATCTTACTGACTCGTTATCTATATGGTGACGGTGTCAGAATCAGTAAGAGTTC TGGAATAGAAGTATATAACTGCAGGATGCAGTCTTCAGGACACGATGGAGTGTCATTTTTATCCGGCACTAAAGATTCCA GAATGTACAACTGTTATGTTGAGGTTCAGACCAACACAGGTGTCAGGGTAGACAACTGTGCAAATATAGAGGTAGATCAC AACACCTTCACAGGTAGCGCCGGGTCCGGATGGTGCTGTGTTGAGCTGGAAAACAAACTGACAAATGTGGATGTCCATCA CAACATTATGCATGATTACAAAGGATCAAGCAGCAGCGCAGGCATTGGTAACTGGCACGCAAGCGGGTCGATTAGCGTTC GTGATAATGTAATGTGGAACGTGTCACCTTACATCCAGGTGGGCTCAGGTTCAAACATATTAGGACCATCTGACCGCAGC GTTGAGAACTGGGTAGCCAAAGGATACGGCTATGGATCTCTTGGAAGTGCATCGAGCTCACAGAGTACAGAAACTGTAAG CCCGACATCCGAGGAAGATTCCAAGACGACTGCTAATGAAACTGCTGTAACAGAGACAGAAGAAACCGAACTTGCTACGG AAACAAAAGAAACTGAAGTTGCAACAGCTAATAACCAGACAGCAGAGAATGAAACTGCAATAACGAAAGCTGCTCCAGAA CAGGTTACTGGAACTGATAACGAATCACTGACAGAAGAGAATATATCTGAGACAGGCACCCAGACAGGAGTTAATGAGCC TCCTGTAACAGAGGCTGATCCTGAACAGGTGGTTGAAACTGATAAGACATCATTGACAGAAGAGAATTCATCAGACATTA TAGACAATCGCCTCAAGGAATCCACACCTGATACGGTTTATCAGGACAAAGAATATCTCGACATCGGAGGCAGACCTGGA ATAGGAAAGTACAGAGACCTGCTTTTATTTAATCTTAGCGAATACAACGATGCAGAAAATATTAGCAACGCCACTCTGTC TCTCTACTGGTACTATCCCGATGGAATTGAAAGGCCAGAGGACACAATCGTAGAAGTATACAGACCAGCTGCAGCCTGGA ACCCTGAAAATGTAACCTGGAACACCAGGGACAATGGGGTGCTCTGGACACAGCCCGGAGGAGACTGGTTTGACATGAAT AACGTCTCTCAGGGAGATGCGCCATATGCCACAATAACTATTAAGGGCAGTGATATACCGGATAACAGGTACTACGAGCT GAACGTAACAGACCTCGTAAAAGAGTATGTCAGCGGCGAATACGAAAACACAGGGTTCCTTATAAAAACTCGTGCTGAGA ATGCAGACTATGTAGCATTCTACAGCAGTGAAATTGATGATGAAAACCAGCGCCCAATGCTGGCCATAGAAGAAAAAATA TAA
Upstream 100 bases:
>100_bases GATGCCTGAAATTAAGAAGGAAACCCTATTCCTGACAGCATGTTCTCGTCTAACGTTCGTATGTGCTTTGGGGAAATATA CTGAAACCCAATAAAACTTT
Downstream 100 bases:
>100_bases TCTGGCACCCTTAATTGAAAGAGACAACTTGAAAAATCCGGTGTTTGTGAGATTATAAAAATCTCCTTACCGGATATTTC AGTTTCTCCTCTCTGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINNAINSVAAGATSSNPGVVILG AGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSPAYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLT SVTNAKVHDILLTRYLYGDGVRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWNVSPYIQVGSGSNILGPSDRS VENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANETAVTETEETELATETKETEVATANNQTAENETAITKAAPE QVTGTDNESLTEENISETGTQTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTWNTRDNGVLWTQPGGDWFDMN NVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGEYENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI
Sequences:
>Translated_640_residues MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINNAINSVAAGATSSNPGVVILG AGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSPAYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLT SVTNAKVHDILLTRYLYGDGVRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWNVSPYIQVGSGSNILGPSDRS VENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANETAVTETEETELATETKETEVATANNQTAENETAITKAAPE QVTGTDNESLTEENISETGTQTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTWNTRDNGVLWTQPGGDWFDMN NVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGEYENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI >Mature_640_residues MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINNAINSVAAGATSSNPGVVILG AGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSPAYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLT SVTNAKVHDILLTRYLYGDGVRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWNVSPYIQVGSGSNILGPSDRS VENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANETAVTETEETELATETKETEVATANNQTAENETAITKAAPE QVTGTDNESLTEENISETGTQTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTWNTRDNGVLWTQPGGDWFDMN NVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGEYENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69116; Mature: 69116
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH AINSVAAGATSSNPGVVILGAGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSP HHHHHHCCCCCCCCCEEEECCCCEEEECCEEEECCEEEEECCCCEEEEEECCEECCCCCE AYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLTSVTNAKVHDILLTRYLYGDG EEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCC VRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH EEEECCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEECCCCEEECCCEEEEECC NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWN CEEECCCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCEECCCEEEEECCEEEE VSPYIQVGSGSNILGPSDRSVENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANE CCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAVTETEETELATETKETEVATANNQTAENETAITKAAPEQVTGTDNESLTEENISETGT CEECCCCHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCC QTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG CCCCCCCCCCCCCHHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCC IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTW CCCCEEEEEEECHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEE NTRDNGVLWTQPGGDWFDMNNVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGE CCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHCCC YENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCC >Mature Secondary Structure MNPLKFQSQPKGDTMLKRQIGTLFLITCLILTAVPAALGAQNTVTVNPASGSDAQTAINN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH AINSVAAGATSSNPGVVILGAGTYKISAPIILKSNVVLKGAGDNTIIFATGSVCNSDGSP HHHHHHCCCCCCCCCEEEECCCCEEEECCEEEECCEEEEECCCCEEEEEECCEECCCCCE AYIYGSGVSNVEVSHLQFQSTATGPKDGGHGDYRNCIKLTSVTNAKVHDILLTRYLYGDG EEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCC VRISKSSGIEVYNCRMQSSGHDGVSFLSGTKDSRMYNCYVEVQTNTGVRVDNCANIEVDH EEEECCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEEEEEECCCCEEECCCEEEEECC NTFTGSAGSGWCCVELENKLTNVDVHHNIMHDYKGSSSSAGIGNWHASGSISVRDNVMWN CEEECCCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCEECCCEEEEECCEEEE VSPYIQVGSGSNILGPSDRSVENWVAKGYGYGSLGSASSSQSTETVSPTSEEDSKTTANE CCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAVTETEETELATETKETEVATANNQTAENETAITKAAPEQVTGTDNESLTEENISETGT CEECCCCHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCC QTGVNEPPVTEADPEQVVETDKTSLTEENSSDIIDNRLKESTPDTVYQDKEYLDIGGRPG CCCCCCCCCCCCCHHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCC IGKYRDLLLFNLSEYNDAENISNATLSLYWYYPDGIERPEDTIVEVYRPAAAWNPENVTW CCCCEEEEEEECHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEE NTRDNGVLWTQPGGDWFDMNNVSQGDAPYATITIKGSDIPDNRYYELNVTDLVKEYVSGE CCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHCCC YENTGFLIKTRAENADYVAFYSSEIDDENQRPMLAIEEKI CCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA