Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227217

Identifier: 21227217

GI number: 21227217

Start: 1307149

End: 1307688

Strand: Direct

Name: 21227217

Synonym: MM_1115

Alternate gene names: NA

Gene position: 1307149-1307688 (Clockwise)

Preceding gene: 21227216

Following gene: 21227220

Centisome position: 31.91

GC content: 44.26

Gene sequence:

>540_bases
ATGTTTATTTTCGGTCATATAGGTATAACCCTGGGAATCTTCTATTTGCTGAGCCGTCTATTTCCGGAAAAGAATATTCC
CGTAGATATTAAATGGATAGCTTTTGGAGCACTCCTTCCGGACTTTATTGACAAACCCCTTGGCAGGATAGTCCTTGCTG
AGACCATAGGAAGCGGGAGGATATTCGCCCATACCCTTATTTTTGCGATCCTGCTGGGGCTGGCGGCATACTACATCTTT
TACCATAAGGGCTGGACTGCCCCCCTGATCATTGCAGGCGCTTCATTCTGTCATGTACTTGAGGATCAGATGTGGAACTC
TCCCAGAGCCTTTCTCTGGCCGTTTCTCGGATGGGAGTTTCCAAGAGACACGTTTTCCGGAGGTTTTATTGAATACTTAA
TTGGAATCCTTAATCGCTCATACGACCCGGCTTATTCAGGTGTGTTTATTCCGGAAATAATAGGTATAGGAATAATTCTC
CTGTTTGCAGGCAACCATATAAGGTCAAAAATGAAAGAAAACCACAGAACAGATTCCTGA

Upstream 100 bases:

>100_bases
GTGAATCTGCAGTAATAAAAAATATTTAAAAACTGTGCTGGCATGTCTTTAAGGCAGGCCAGCCAAAAAATAATTATATG
GTATATACTTTTTTAATCTG

Downstream 100 bases:

>100_bases
CCGAAAAAACACTTTTTTTGACCCAAACGCCTTTTTCAGTTAAATCTAATTGGTTCTTTTTCAGTGAAATGTAATTAGTG
CTCACACCACACCTTCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGRIFAHTLIFAILLGLAAYYIF
YHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEFPRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIIL
LFAGNHIRSKMKENHRTDS

Sequences:

>Translated_179_residues
MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGRIFAHTLIFAILLGLAAYYIF
YHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEFPRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIIL
LFAGNHIRSKMKENHRTDS
>Mature_179_residues
MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGRIFAHTLIFAILLGLAAYYIF
YHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEFPRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIIL
LFAGNHIRSKMKENHRTDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20254; Mature: 20254

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGR
CEEEEHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCH
IFAHTLIFAILLGLAAYYIFYHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEF
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIILLFAGNHIRSKMKENHRTDS
CCHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFIFGHIGITLGIFYLLSRLFPEKNIPVDIKWIAFGALLPDFIDKPLGRIVLAETIGSGR
CEEEEHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCCCH
IFAHTLIFAILLGLAAYYIFYHKGWTAPLIIAGASFCHVLEDQMWNSPRAFLWPFLGWEF
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PRDTFSGGFIEYLIGILNRSYDPAYSGVFIPEIIGIGIILLFAGNHIRSKMKENHRTDS
CCHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA