Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227204

Identifier: 21227204

GI number: 21227204

Start: 1296092

End: 1296412

Strand: Direct

Name: 21227204

Synonym: MM_1102

Alternate gene names: NA

Gene position: 1296092-1296412 (Clockwise)

Preceding gene: 21227203

Following gene: 21227205

Centisome position: 31.64

GC content: 46.73

Gene sequence:

>321_bases
ATGCGAAAGTTTATAGGACTATTTGTAAACAAGCTCTTAAACCGAAAAAATCCCGAAACACGAAATTCCGGATACAGAAA
ACTCCTTATAAACCGAAAAACCAAAGGTGAAACTATTGTCCCTTACAGCAAGAATAGGGGAGCTCAGTCCCTACCTCCGG
CTGCTGAGGCCCGAACTATACTATATGGACCTTACCCTCCCGGCCTCAAGTGCAATTCTCGCTTCTTACCTGGCAACCGG
AGAGCTCCCCGAAATTCTCCCATTCCTGGTTGCCGTAGTCGGAGGCTTTGCGGCCATAACCAGTTCATATGTCTTCAATG
A

Upstream 100 bases:

>100_bases
GTTTAGAACCCTGCTCAATAACCCTTCCAATTGTCTAACTTTCAACTCTCCCGCATTGGCAGAATCTTTCGGTAAAAAAG
AAAAAGGAAACTTTTTTGAA

Downstream 100 bases:

>100_bases
CTGCTGTGATATTGATATAGACACGATCAATCTTCCAGGCAGGCCCCTTCCTTCCTCAAAGGTTTCGAAAAACTCAGCAA
TGCTATATGCCGGGCTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRKFIGLFVNKLLNRKNPETRNSGYRKLLINRKTKGETIVPYSKNRGAQSLPPAAEARTILYGPYPPGLKCNSRFLPGNR
RAPRNSPIPGCRSRRLCGHNQFICLQ

Sequences:

>Translated_106_residues
MRKFIGLFVNKLLNRKNPETRNSGYRKLLINRKTKGETIVPYSKNRGAQSLPPAAEARTILYGPYPPGLKCNSRFLPGNR
RAPRNSPIPGCRSRRLCGHNQFICLQ
>Mature_106_residues
MRKFIGLFVNKLLNRKNPETRNSGYRKLLINRKTKGETIVPYSKNRGAQSLPPAAEARTILYGPYPPGLKCNSRFLPGNR
RAPRNSPIPGCRSRRLCGHNQFICLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12051; Mature: 12051

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFIGLFVNKLLNRKNPETRNSGYRKLLINRKTKGETIVPYSKNRGAQSLPPAAEARTI
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCEE
LYGPYPPGLKCNSRFLPGNRRAPRNSPIPGCRSRRLCGHNQFICLQ
EECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MRKFIGLFVNKLLNRKNPETRNSGYRKLLINRKTKGETIVPYSKNRGAQSLPPAAEARTI
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCEE
LYGPYPPGLKCNSRFLPGNRRAPRNSPIPGCRSRRLCGHNQFICLQ
EECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA