| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227205
Identifier: 21227205
GI number: 21227205
Start: 1296492
End: 1297148
Strand: Direct
Name: 21227205
Synonym: MM_1103
Alternate gene names: NA
Gene position: 1296492-1297148 (Clockwise)
Preceding gene: 21227204
Following gene: 21227206
Centisome position: 31.65
GC content: 48.86
Gene sequence:
>657_bases ATGCTATATGCCGGGCTGCTTTTACTGATTGCGGGAGCTGCTGCTTTTTACCTGAACCCTGAATCTCTTGTGGTTCTCTT TATCGCAGCTGCAACCATAACAATTTACTCGATCTTTGCAAAAAGAAACACCTTTCTAAGTTTTCTGCCTGTGGGGATAT CTTATGGTCTCGTGCCTATCGGGGTATGGCTTGCATTTGACCCGGCAGGGATCCTGAAAGGCAGTGATGGAGTAATTCTG CCCCTCCCAGCAATCTGTTTCGGTCTAATGATGTGCGTTACTGACTGGGCTTTTACACTCGGAGGAGTTGCCAGGGATGT GGAAGGGGACAGGTTAAAGGGTGCACCTACAATGCCCGTAACCTTCGGGATCCCCTTTACCGCCAGATTTGTGACCTTCT GGTGGATTGTAGGGGTTATTGCCTCGGTTATCATAGGCTGGTCAGCACATCTGGGCCCGGTATTTTTTGCAGGAGCCCTT GCTTCAGGACTCTGGATGCTCGCTCAGTGCATTGACTTTATAAAACACCCGACGCCTGAGAGAGGCGGCGCACTTTTCCT TAACGGCTCAAATTACAGGGCAGTAATGTTCGGGTCAATGATTCTGGATGTTGTGCTCTGCATATATATTGGGTCTTATA CCTCCATACTCTGGTAA
Upstream 100 bases:
>100_bases CAGTTCATATGTCTTCAATGACTGCTGTGATATTGATATAGACACGATCAATCTTCCAGGCAGGCCCCTTCCTTCCTCAA AGGTTTCGAAAAACTCAGCA
Downstream 100 bases:
>100_bases AAATCCCTGTTGGGAAGGATAGAAAAAAATGGACGCAGATATAATTGTAATCGGTGCATCTCCTGCAGGGCTCATGGCCG CCAGAAATGCCTGTGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Prenyltransferase UbiA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MLYAGLLLLIAGAAAFYLNPESLVVLFIAAATITIYSIFAKRNTFLSFLPVGISYGLVPIGVWLAFDPAGILKGSDGVIL PLPAICFGLMMCVTDWAFTLGGVARDVEGDRLKGAPTMPVTFGIPFTARFVTFWWIVGVIASVIIGWSAHLGPVFFAGAL ASGLWMLAQCIDFIKHPTPERGGALFLNGSNYRAVMFGSMILDVVLCIYIGSYTSILW
Sequences:
>Translated_218_residues MLYAGLLLLIAGAAAFYLNPESLVVLFIAAATITIYSIFAKRNTFLSFLPVGISYGLVPIGVWLAFDPAGILKGSDGVIL PLPAICFGLMMCVTDWAFTLGGVARDVEGDRLKGAPTMPVTFGIPFTARFVTFWWIVGVIASVIIGWSAHLGPVFFAGAL ASGLWMLAQCIDFIKHPTPERGGALFLNGSNYRAVMFGSMILDVVLCIYIGSYTSILW >Mature_218_residues MLYAGLLLLIAGAAAFYLNPESLVVLFIAAATITIYSIFAKRNTFLSFLPVGISYGLVPIGVWLAFDPAGILKGSDGVIL PLPAICFGLMMCVTDWAFTLGGVARDVEGDRLKGAPTMPVTFGIPFTARFVTFWWIVGVIASVIIGWSAHLGPVFFAGAL ASGLWMLAQCIDFIKHPTPERGGALFLNGSNYRAVMFGSMILDVVLCIYIGSYTSILW
Specific function: Unknown
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.-
Molecular weight: Translated: 23412; Mature: 23412
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYAGLLLLIAGAAAFYLNPESLVVLFIAAATITIYSIFAKRNTFLSFLPVGISYGLVPI CHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GVWLAFDPAGILKGSDGVILPLPAICFGLMMCVTDWAFTLGGVARDVEGDRLKGAPTMPV HHHEEECCCHHEECCCCEEECHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCE TFGIPFTARFVTFWWIVGVIASVIIGWSAHLGPVFFAGALASGLWMLAQCIDFIKHPTPE EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RGGALFLNGSNYRAVMFGSMILDVVLCIYIGSYTSILW CCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLYAGLLLLIAGAAAFYLNPESLVVLFIAAATITIYSIFAKRNTFLSFLPVGISYGLVPI CHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GVWLAFDPAGILKGSDGVILPLPAICFGLMMCVTDWAFTLGGVARDVEGDRLKGAPTMPV HHHEEECCCHHEECCCCEEECHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCE TFGIPFTARFVTFWWIVGVIASVIIGWSAHLGPVFFAGALASGLWMLAQCIDFIKHPTPE EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RGGALFLNGSNYRAVMFGSMILDVVLCIYIGSYTSILW CCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA