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The map label for this gene is hyfE [C]

Identifier: 21227163

GI number: 21227163

Start: 1245139

End: 1245825

Strand: Direct

Name: hyfE [C]

Synonym: MM_1061

Alternate gene names: 21227163

Gene position: 1245139-1245825 (Clockwise)

Preceding gene: 21227162

Following gene: 21227164

Centisome position: 30.4

GC content: 46.87

Gene sequence:

>687_bases
ATGATTGACCCGACCTTCCTTGAAGGCATAATTAAGATCCTTTTCGTCTTTGTCCTCATCAGTGCAGGGTTGATCATTTC
AACCCGAAACCTGAGTTCGGTATTGACCGCATACACAATCCAGTCTTTCCTGCTGGCTTCAGTCTCATCTCTCCTTTACC
TGATGGACGGGAAAGACCAGCTCCTGCTACTGGCGGTCCTGACCCTGGCAAGCAAGGTAATCCTGATTCCTTACTTTATT
TCCAGGATAGAAGAGAAAATAAAGATAGGGAGAGACCTCCATTTTACATATCTGGAGCCAACGCCCTCTCTTCTGCTGAG
TATAGGTCTTATCATCCTCTCCTACACCTTCCTTTCAAGGGTTTTCGAAGGTCTGCCCCTCTCTAAGCTTTTCTTTTTCG
GGGCGGTAATAGGGCTTTCCCTGACCCTGATGGGTATGCTTGTAATATTCAGCAGAAAAAGAGTCATCACAAAAGCCCTC
GGTTACCTCAGCATGGAAAACGGGGTGCTGATGTTTGGCCTGTTTGTGACCGAGCTCCCCTTCATTATAGAAGTCCTGAT
TATAATTGACCTTATTATCCTGGTCATACTGACCACAATCCTGGCTGTGGGAATGGACTCCAGCATTGAAGAATACAGGC
AAAAGTTCCGGAAACTGCAGGTATGGGCAGGAGGTGAATCCCAGTGA

Upstream 100 bases:

>100_bases
TTGAATCATCCCTTGCAAAGATGAGGCTATTCAGGCTTCCCGCATTTTACGTCATGGCGTTTTTCTTTTCAGCCATTACA
ATCCTTATCGAGGTGTTTGC

Downstream 100 bases:

>100_bases
TCCGGTACTACCTTCTAATAATGGGAATATTCCTGGCATTCGGCCTTATTCCGAAATCTCACAGGCTTATGAATGCACTT
GCCGCAGGAAACGGAATGCT

Product: hydrogenase-4 component E

Products: H2; oxidized ferredoxin [C]

Alternate protein names: Hydrogenase Subunit

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIDPTFLEGIIKILFVFVLISAGLIISTRNLSSVLTAYTIQSFLLASVSSLLYLMDGKDQLLLLAVLTLASKVILIPYFI
SRIEEKIKIGRDLHFTYLEPTPSLLLSIGLIILSYTFLSRVFEGLPLSKLFFFGAVIGLSLTLMGMLVIFSRKRVITKAL
GYLSMENGVLMFGLFVTELPFIIEVLIIIDLIILVILTTILAVGMDSSIEEYRQKFRKLQVWAGGESQ

Sequences:

>Translated_228_residues
MIDPTFLEGIIKILFVFVLISAGLIISTRNLSSVLTAYTIQSFLLASVSSLLYLMDGKDQLLLLAVLTLASKVILIPYFI
SRIEEKIKIGRDLHFTYLEPTPSLLLSIGLIILSYTFLSRVFEGLPLSKLFFFGAVIGLSLTLMGMLVIFSRKRVITKAL
GYLSMENGVLMFGLFVTELPFIIEVLIIIDLIILVILTTILAVGMDSSIEEYRQKFRKLQVWAGGESQ
>Mature_228_residues
MIDPTFLEGIIKILFVFVLISAGLIISTRNLSSVLTAYTIQSFLLASVSSLLYLMDGKDQLLLLAVLTLASKVILIPYFI
SRIEEKIKIGRDLHFTYLEPTPSLLLSIGLIILSYTFLSRVFEGLPLSKLFFFGAVIGLSLTLMGMLVIFSRKRVITKAL
GYLSMENGVLMFGLFVTELPFIIEVLIIIDLIILVILTTILAVGMDSSIEEYRQKFRKLQVWAGGESQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25449; Mature: 25449

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPTFLEGIIKILFVFVLISAGLIISTRNLSSVLTAYTIQSFLLASVSSLLYLMDGKDQ
CCCHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLLLAVLTLASKVILIPYFISRIEEKIKIGRDLHFTYLEPTPSLLLSIGLIILSYTFLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
VFEGLPLSKLFFFGAVIGLSLTLMGMLVIFSRKRVITKALGYLSMENGVLMFGLFVTELP
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FIIEVLIIIDLIILVILTTILAVGMDSSIEEYRQKFRKLQVWAGGESQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIDPTFLEGIIKILFVFVLISAGLIISTRNLSSVLTAYTIQSFLLASVSSLLYLMDGKDQ
CCCHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
LLLLAVLTLASKVILIPYFISRIEEKIKIGRDLHFTYLEPTPSLLLSIGLIILSYTFLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
VFEGLPLSKLFFFGAVIGLSLTLMGMLVIFSRKRVITKALGYLSMENGVLMFGLFVTELP
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FIIEVLIIIDLIILVILTTILAVGMDSSIEEYRQKFRKLQVWAGGESQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton; reduced ferredoxin [C]

Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA