| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227078
Identifier: 21227078
GI number: 21227078
Start: 1156103
End: 1157836
Strand: Reverse
Name: 21227078
Synonym: MM_0976
Alternate gene names: NA
Gene position: 1157836-1156103 (Counterclockwise)
Preceding gene: 21227083
Following gene: 21227076
Centisome position: 28.27
GC content: 45.44
Gene sequence:
>1734_bases GTGCATGGAGAGGGAGGGTCTTCAGGATCTGAACAGGAAACTTCTGATTCACTGCCTCAAGAAAACGTTTTATCTAATAA AGAGATCTCATACTCTGTCTCGTCTATTTTGAAACAGACTGATCACGATTCGAGAATAACTTCTAAAAAAACAATTGAAA ATAAAAAAGAAACTGAAGAAGCCTTGGAAGCATATGTTCAGCTCTTTCCCGGTACAGGTGCAGAAGTCCTGGCTCCTCTT TCCGAGCTTAAAGAATGGGACGAAGATTCCAGTATAGCTGCAGTCTGCGTTAAACCGGGATCAATTGAAGAGCTCTACTC TCTTGAAGGCGTGCGTTCTGTCGAGCTGGCTGTTCCTCCCGTTATCAGAAAAATTGAGAGGGGAGATAAAGAGTCTCTTT CTTCATGGAGCTTCTGGAAACAGGGCGGTATAAGTGGAACCGGAATTAAAATAGGGATAATTTCCGATGGAGTAGAAGAC ATCTCTGAAGCTGATAGATCGGGAGCCCTTCCTGAAAGCGTGCATGTCCTTTCTCCGGGAAAAGGAACTGAAGGGACTGT AATACTCGAAGTAGTCCATAAGGTGTCTCCGGGTGCAGAACTTTACTTCCACAGCGCAGGAAACAACAAGCTTGAATTTA ACAGGGCAATTGACGCTCTTATCGCCGAAGGCTGCCAGATTATCTGCGATGACGTTGGCTGGCCTGACGAACCTTTTTTT GAAGATGGTATTGTAGCTTCTCATGTCAGAGAGGTTATTGAAAGACAGGATATTCTTTATGTGAGCGCAGCAGGCAACGA TGCAGGGCGTCATTATCAGGGAATGTTTTTTGACAATGGGTCAGGCTGGCATGATTTCAGCTCAGGGACCAGTGATTCCA GAAATATTTATATGGACGTACCTCAGGGAGAAAAAATAACTGTAGTTCTTCAGTGGAATGACCCCTGGAACTGCTCCGAA AACGACTATGACCTCTATCTGTGTGACCGCTGCAGCGGGGAAGAACTGGATGCAAGTGAAAAGGTTCAGGGCGGCACAGA AAAACCTCTCGAATACATTCAGTACACCAATATGGAAGACACCATAAAAAAAGTGAACATTTCAGTTAAAAAACACTGCG GGCAGGACAGGATGCTGGAGATTTATATTTACGGAAACTCTTCAGTAAAGATCCATCCGGATAATCTGGTTGAGGAGGAC TCTGTATTCGGGCACCCTGCCGTCCAGGATGTTATCTGTGTTGGAGCGGTTGATTCTGGAAATTTGCAGAAAAGCATAGC GTCATACTCCTCTCGCGGTCCTGTAAGCATTTACTACCCTGAGTACGAGTTAAGGAACAAGATAGACCTTAGCGGGCCCG GGAGTGTGAGAGTTTCAGGCACAAACGGGAAGGGAAGCCTTTTTGCAGGTACAAGTGCTTCTGCTCCATCCGTAGCGGGA ATCGGGGCTCTTGTCTGGAGCATGTGCCCTGAAAAAAACAGCAGTGAAATACGCGAGATCCTGTGTTTTTCAGCCGAAGA CCTTGGAGATCCGGGTTATGATACCGTTTTCGGGCACGGCTCTGTCAATAGCAACACAGCTCATTCTCTAAAAAAACTTT ACGCAGATTCCAGCTTATCATCGAAAACATATGGAGTCTCATCTGCAGAAACAAGAGGAACATTTTCACTGAAAAATTCC ATACCCTTTGAACAGCTCTGCTCTCTCGCAAAATTGTCTTCGAGAGACAGGTAA
Upstream 100 bases:
>100_bases ATCGGGGGTAGTGTATCTGGGGAGTTACACCGCAAAAATACTTTATTTATTAACGCTGGCTACGGTATTTACATGTCTAC TTTTTTCTACCAGTTTTGTA
Downstream 100 bases:
>100_bases AGGGACTTCTCAGGCGAAAAGGCAGTTTACCGATCCCAGGGGTGAATTTCCTGCCGGGATTCATTCTCAGGTTCATTCAG CAAGATTTTCACTCCAAAAG
Product: putative protease
Products: NA
Alternate protein names: Cell Surface Protein; Fibronectin Type III Domain-Containing Protein; Proprotein Convertase P; TPR Repeat-Containing Protein; Protease; Subtilisin-Like Serine Protease; Peptidase Families S8 And
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEEALEAYVQLFPGTGAEVLAPL SELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPPVIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVED ISEADRSGALPESVHVLSPGKGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDVPQGEKITVVLQWNDPWNCSE NDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMEDTIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEED SVFGHPAVQDVICVGAVDSGNLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLSSKTYGVSSAETRGTFSLKNS IPFEQLCSLAKLSSRDR
Sequences:
>Translated_577_residues MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEEALEAYVQLFPGTGAEVLAPL SELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPPVIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVED ISEADRSGALPESVHVLSPGKGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDVPQGEKITVVLQWNDPWNCSE NDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMEDTIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEED SVFGHPAVQDVICVGAVDSGNLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLSSKTYGVSSAETRGTFSLKNS IPFEQLCSLAKLSSRDR >Mature_577_residues MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEEALEAYVQLFPGTGAEVLAPL SELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPPVIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVED ISEADRSGALPESVHVLSPGKGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDVPQGEKITVVLQWNDPWNCSE NDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMEDTIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEED SVFGHPAVQDVICVGAVDSGNLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLSSKTYGVSSAETRGTFSLKNS IPFEQLCSLAKLSSRDR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62603; Mature: 62603
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEE CCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH ALEAYVQLFPGTGAEVLAPLSELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPP HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCH VIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVEDISEADRSGALPESVHVLSPG HHHHHHCCCHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCC KGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF CCCCCEEEEEEHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCCCCC EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDV CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC PQGEKITVVLQWNDPWNCSENDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMED CCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHCCHHH TIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEEDSVFGHPAVQDVICVGAVDSG HHHHHCCHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHEEEEECCCCC NLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG HHHHHHHHHCCCCCEEEECCCHHHCCEECCCCCCCEEEECCCCCCCEEECCCCCCCCHHH IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLS HHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCC SKTYGVSSAETRGTFSLKNSIPFEQLCSLAKLSSRDR CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MHGEGGSSGSEQETSDSLPQENVLSNKEISYSVSSILKQTDHDSRITSKKTIENKKETEE CCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH ALEAYVQLFPGTGAEVLAPLSELKEWDEDSSIAAVCVKPGSIEELYSLEGVRSVELAVPP HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCEEEECCCH VIRKIERGDKESLSSWSFWKQGGISGTGIKIGIISDGVEDISEADRSGALPESVHVLSPG HHHHHHCCCHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCC KGTEGTVILEVVHKVSPGAELYFHSAGNNKLEFNRAIDALIAEGCQIICDDVGWPDEPFF CCCCCEEEEEEHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCEEEECCCCCCCCCCC EDGIVASHVREVIERQDILYVSAAGNDAGRHYQGMFFDNGSGWHDFSSGTSDSRNIYMDV CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC PQGEKITVVLQWNDPWNCSENDYDLYLCDRCSGEELDASEKVQGGTEKPLEYIQYTNMED CCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHHCCHHH TIKKVNISVKKHCGQDRMLEIYIYGNSSVKIHPDNLVEEDSVFGHPAVQDVICVGAVDSG HHHHHCCHHHHHCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHEEEEECCCCC NLQKSIASYSSRGPVSIYYPEYELRNKIDLSGPGSVRVSGTNGKGSLFAGTSASAPSVAG HHHHHHHHHCCCCCEEEECCCHHHCCEECCCCCCCEEEECCCCCCCEEECCCCCCCCHHH IGALVWSMCPEKNSSEIREILCFSAEDLGDPGYDTVFGHGSVNSNTAHSLKKLYADSSLS HHHHHHHHCCCCCHHHHHHHHHHCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCC SKTYGVSSAETRGTFSLKNSIPFEQLCSLAKLSSRDR CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA