| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227083
Identifier: 21227083
GI number: 21227083
Start: 1160983
End: 1161411
Strand: Reverse
Name: 21227083
Synonym: MM_0981
Alternate gene names: NA
Gene position: 1161411-1160983 (Counterclockwise)
Preceding gene: 21227084
Following gene: 21227078
Centisome position: 28.35
GC content: 45.69
Gene sequence:
>429_bases TTGGAAACTGATTCTGAACGCGACTCTGAACTCCTGAAAATCAGGGCACATCACCTCTGCTGCATCCAGGGATTCCAGGG ATATGGATATAGTCCTGCATTTGTTGCCAATATGCGGGCTGTGATTTCGGATCTGGAATCTCTCCCTTCCAGGCCTCTTA AGCTTGTGACAGAATGTGATGCAATCTGCGTTTCCTGCCCGAGCAAAAGGGAGTGTACTATTCAGGAATCTATCCTCTCC CGCAGGATTAGACAGATGGATCTTGTTGTCCTGGATAAATTAAAAATAGAGGATGGAAGCGTTATAAATGCAGATGAAGC TTTCGGGCTCATAAATTCCAGAATTAACAGTTCTTCGGATGTTGAAGAGGTCTGCGGAACCTGCAAGTGGAGGCAAAAAT GCCTCTGGTATATGCAGGCAGGCAAATAA
Upstream 100 bases:
>100_bases GAATGTGGCCATACTCTTGAGAATGTTGAAGTTGAAGCCTATTTTTATTTGCGATGCTAAAACACCGGAGAAATACATGC CAGAAAAATCTACATCTAAA
Downstream 100 bases:
>100_bases AAGCCGGCAGGAAAATGTTTTCTGCAGTTTCATATCCTGCAGTTCAACTTAAACCTGCACTGATCTCATATATTTTTGCT AAAAACTCGATGTTCTGAAC
Product: Iron-sulfur binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues METDSERDSELLKIRAHHLCCIQGFQGYGYSPAFVANMRAVISDLESLPSRPLKLVTECDAICVSCPSKRECTIQESILS RRIRQMDLVVLDKLKIEDGSVINADEAFGLINSRINSSSDVEEVCGTCKWRQKCLWYMQAGK
Sequences:
>Translated_142_residues METDSERDSELLKIRAHHLCCIQGFQGYGYSPAFVANMRAVISDLESLPSRPLKLVTECDAICVSCPSKRECTIQESILS RRIRQMDLVVLDKLKIEDGSVINADEAFGLINSRINSSSDVEEVCGTCKWRQKCLWYMQAGK >Mature_142_residues METDSERDSELLKIRAHHLCCIQGFQGYGYSPAFVANMRAVISDLESLPSRPLKLVTECDAICVSCPSKRECTIQESILS RRIRQMDLVVLDKLKIEDGSVINADEAFGLINSRINSSSDVEEVCGTCKWRQKCLWYMQAGK
Specific function: Unknown
COG id: COG3543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15993; Mature: 15993
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METDSERDSELLKIRAHHLCCIQGFQGYGYSPAFVANMRAVISDLESLPSRPLKLVTECD CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AICVSCPSKRECTIQESILSRRIRQMDLVVLDKLKIEDGSVINADEAFGLINSRINSSSD HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEECHHHHHHHHHHHCCCCCC VEEVCGTCKWRQKCLWYMQAGK HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure METDSERDSELLKIRAHHLCCIQGFQGYGYSPAFVANMRAVISDLESLPSRPLKLVTECD CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AICVSCPSKRECTIQESILSRRIRQMDLVVLDKLKIEDGSVINADEAFGLINSRINSSSD HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEECHHHHHHHHHHHCCCCCC VEEVCGTCKWRQKCLWYMQAGK HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA