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The map label for this gene is yciH [C]

Identifier: 21226960

GI number: 21226960

Start: 1012361

End: 1012669

Strand: Reverse

Name: yciH [C]

Synonym: MM_0858

Alternate gene names: 21226960

Gene position: 1012669-1012361 (Counterclockwise)

Preceding gene: 21226967

Following gene: 21226959

Centisome position: 24.72

GC content: 42.39

Gene sequence:

>309_bases
ATGAGCAGCGGAATGTGCCCGGTATGCGGGCTTCCAAAAGAACTTTGCATATGCGAAGAGGTTGCAAAAGAGCAACAGAG
AATAACTGTTAAAGTTAACAGAAGAAGATATGGTAAGGAAGTCACTGTCGTAGAAGGTTTTGATGCTAGTGAAATTGACC
TTCATGAACTGTCCACTTACCTGAAATCAAAGTTTGCATGCGGCGGTACAGTAAAAGGAAATACGGTCGAACTTCAGGGC
AATCACCTGACCCGCATGAAAGAAGTCCTCATGGAAAAGGGTTTCTCTGCTGAACAAATCAAAAATTAA

Upstream 100 bases:

>100_bases
GCTTTAATATCATCATTGATAAGTACTTTATATCTATTTAGATATTTTCGGATGTAAATTACATATACAATGATTACAAA
TTTGGAGGACATACTAACAA

Downstream 100 bases:

>100_bases
ACTCTGAATCCGTCCCCCACCGGAACTCTCGAGCCTGAGATATTAGCTTATAGATTCGGAGTTTTACGTATCTTTTTGCC
AGTTTTTCGATAGCATGCAC

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSSGMCPVCGLPKELCICEEVAKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTVKGNTVELQG
NHLTRMKEVLMEKGFSAEQIKN

Sequences:

>Translated_102_residues
MSSGMCPVCGLPKELCICEEVAKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTVKGNTVELQG
NHLTRMKEVLMEKGFSAEQIKN
>Mature_101_residues
SSGMCPVCGLPKELCICEEVAKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTYLKSKFACGGTVKGNTVELQGN
HLTRMKEVLMEKGFSAEQIKN

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11382; Mature: 11251

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGMCPVCGLPKELCICEEVAKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTY
CCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHH
LKSKFACGGTVKGNTVELQGNHLTRMKEVLMEKGFSAEQIKN
HHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
SSGMCPVCGLPKELCICEEVAKEQQRITVKVNRRRYGKEVTVVEGFDASEIDLHELSTY
CCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHH
LKSKFACGGTVKGNTVELQGNHLTRMKEVLMEKGFSAEQIKN
HHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]