| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226959
Identifier: 21226959
GI number: 21226959
Start: 1011797
End: 1012162
Strand: Reverse
Name: 21226959
Synonym: MM_0857
Alternate gene names: NA
Gene position: 1012162-1011797 (Counterclockwise)
Preceding gene: 21226960
Following gene: 21226958
Centisome position: 24.71
GC content: 44.26
Gene sequence:
>366_bases ATGAAAACAACATGCGAAATAATGGTACAAAAAGTCTTGCCTGCTATCAGATCCGAACTCTCAAGGGCAATGATTTTCGA ACATGGGTGTACGCAGCAGGATGTAGCGGATATCCTTGAGCTTTCAAGAGCAGCTGTTTCTCAATATGTGAGTGAAAAAC GAGGAGCTGAAGTTGATTTCTCTGAAGAGACCCAGAACGAAATCCGAAAATTCGCTTCAGTACTCCTGAGCGGAGGTCTA TCTTCTCAGGAGAAAGTCAAGGGTATGTGCAGTATATGCTGTTTCGTCCAGAAATCCGGCTGGTTGTACAGAAATGCTCC CGAAGCCAAAGCCTGCATACTCTGTAAGGATATGAACGAAAAGTGA
Upstream 100 bases:
>100_bases ACCTTCTTTCAGGCGTACTCGCCGGAACCTGAGTCCATCCCGGAAAACCATACAAAAAGTGCGTTTCCATATATTTTATA TTTGCAAGTGTTGGTCTCCA
Downstream 100 bases:
>100_bases AGGATACACTGTGCATCAAATGTAAGGGAAAAGGACTCTGCGGGCGTCCACGTTGCCCTATTCTTGAAAAGTTCAAATCC CTGCAATCAATTTCTCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKTTCEIMVQKVLPAIRSELSRAMIFEHGCTQQDVADILELSRAAVSQYVSEKRGAEVDFSEETQNEIRKFASVLLSGGL SSQEKVKGMCSICCFVQKSGWLYRNAPEAKACILCKDMNEK
Sequences:
>Translated_121_residues MKTTCEIMVQKVLPAIRSELSRAMIFEHGCTQQDVADILELSRAAVSQYVSEKRGAEVDFSEETQNEIRKFASVLLSGGL SSQEKVKGMCSICCFVQKSGWLYRNAPEAKACILCKDMNEK >Mature_121_residues MKTTCEIMVQKVLPAIRSELSRAMIFEHGCTQQDVADILELSRAAVSQYVSEKRGAEVDFSEETQNEIRKFASVLLSGGL SSQEKVKGMCSICCFVQKSGWLYRNAPEAKACILCKDMNEK
Specific function: Unknown
COG id: COG2522
COG function: function code R; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13502; Mature: 13502
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTCEIMVQKVLPAIRSELSRAMIFEHGCTQQDVADILELSRAAVSQYVSEKRGAEVDF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SEETQNEIRKFASVLLSGGLSSQEKVKGMCSICCFVQKSGWLYRNAPEAKACILCKDMNE CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCC K C >Mature Secondary Structure MKTTCEIMVQKVLPAIRSELSRAMIFEHGCTQQDVADILELSRAAVSQYVSEKRGAEVDF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SEETQNEIRKFASVLLSGGLSSQEKVKGMCSICCFVQKSGWLYRNAPEAKACILCKDMNE CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA