| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is nifK2 [H]
Identifier: 21226825
GI number: 21226825
Start: 869316
End: 870686
Strand: Direct
Name: nifK2 [H]
Synonym: MM_0723
Alternate gene names: 21226825
Gene position: 869316-870686 (Clockwise)
Preceding gene: 21226824
Following gene: 21226826
Centisome position: 21.22
GC content: 50.84
Gene sequence:
>1371_bases ATGTTAGACTATACCCCATGTGAAGAGATAACCAGAGAAGCAGTAACCATCAATCCTGCAAAGATCTGCCAGCCAATAGG TGCGGTATATGCGGCTCTTGGTGTCCACAACTGCATGCCTCACAGCCACGGTTCACAGGGCTGCCTTTCGTACCTGCGTA TGTGCCTGAGCAGACACTACCGCGAGAACCCTGTCGCAACTACCAGCAGTTTCTCAGAAGGTACCGCAGTTTTCGGAGGT GCAGCAAACCTCAAGGAAGCCCTTGGAAATCTGACTGCAATCTACAAACCTGAAGTAATTGCCATCCATACAACCTGCGT GGCGGAAACCATAGGAGATGACGTCGGAGTTATCATTGAAGACGTAAGGGCTGAAGAACTCATAGACCCATCAATCAAGA TCTGTGCGGCTTCCACTCCAAGTTACGTGGGCACTCACATAACCGGCTATGACAATATGGTAAAGTCCTTTGTGACCATC TTTGCCAGAAAAACCAAGCCTAACGGAAAACTCAACCTTATCCCCGGCTTCGTGGAACCCGGAGATATCCGGGAAATAAA GCGCATACTCTCAATCATGGGAATTCCGAACATCGTCTTCCCGGACACAACCGATGTTTTTGATGTTCCCCTTACCGGAG AGCCGGGGATGTACCCGAAAGGAGGGACTCCTATTGGAGATATAGAAGATTCCGCAAGTTCTGCAGGGACCATAGCCCTC TGCAGGATGGCAGGAGGATCAGCAGCAAAAATTCTGGAAAGCAAGTTTAAGGTTCCGGCAAAAATAGGGCCTACTCCTAT AGGGATAAGGAACACCGACCGCTTCATAATGAACGCAGCAAAACTTGCCAATGTGGCGATCCCTCTGGAACTCGAGGATG AACGCGGCAGGCTTGTAGATATGATGACCGATGCTCACCCTCATTACCATGGGAAAAAGGTTGCCATCTATGGGGACCCG GACATAATTTCAGGGCTTACGAGCCTTGTGATGGAAATGGGCATGGAACCGGGTGTGGTGCTTACCGGCACCCAGAGCTC TGAATTTGAAAAAGAAGTAGAAGGACTCACAGGTTCCGAGTACCCGGAAGCCGATATTATCTCGGGAGGGGACCTCTTCA TGCTCCACCAGATCATCAAGCGAAAGCCCGTGGACCTCCTCATCGGCAACACATACGGGAAATTCATATCAAGGGCAGAG GATGTGCCCCTTGTAAGGGTAGGATTCCCGATCATGGACCGGGCAAGCCTGCACTATTTCCCGATCATGGGGTACGCCGG AGCTGCACGACTGGTGGAGCGCATAGGAAATACCCTGCTTGACAGGAAAGACAGGGATGCACCGGACTGGTTACTTGAAA CCATCCAGTAA
Upstream 100 bases:
>100_bases AATTTCGCAAGGGACATAGACATGGCTATGCACAGCCCCACCTGGAGGTTCATACGCCCGCCCTGGAAAGGAGAAGGAGA AGAATAAGGAGGGACGAAAA
Downstream 100 bases:
>100_bases GAAAGAAGCCTGAATATAAAGGTAGTGATCTGAAAGGTACTGACCTGAAAATCTCAGAGATGACAGCAAACTGATAAATT CAAAATAGGAAAAAGTGGAA
Product: nitrogenase molybdenum-iron protein subunit beta
Products: NA
Alternate protein names: Dinitrogenase; Nitrogenase component I [H]
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MLDYTPCEEITREAVTINPAKICQPIGAVYAALGVHNCMPHSHGSQGCLSYLRMCLSRHYRENPVATTSSFSEGTAVFGG AANLKEALGNLTAIYKPEVIAIHTTCVAETIGDDVGVIIEDVRAEELIDPSIKICAASTPSYVGTHITGYDNMVKSFVTI FARKTKPNGKLNLIPGFVEPGDIREIKRILSIMGIPNIVFPDTTDVFDVPLTGEPGMYPKGGTPIGDIEDSASSAGTIAL CRMAGGSAAKILESKFKVPAKIGPTPIGIRNTDRFIMNAAKLANVAIPLELEDERGRLVDMMTDAHPHYHGKKVAIYGDP DIISGLTSLVMEMGMEPGVVLTGTQSSEFEKEVEGLTGSEYPEADIISGGDLFMLHQIIKRKPVDLLIGNTYGKFISRAE DVPLVRVGFPIMDRASLHYFPIMGYAGAARLVERIGNTLLDRKDRDAPDWLLETIQ
Sequences:
>Translated_456_residues MLDYTPCEEITREAVTINPAKICQPIGAVYAALGVHNCMPHSHGSQGCLSYLRMCLSRHYRENPVATTSSFSEGTAVFGG AANLKEALGNLTAIYKPEVIAIHTTCVAETIGDDVGVIIEDVRAEELIDPSIKICAASTPSYVGTHITGYDNMVKSFVTI FARKTKPNGKLNLIPGFVEPGDIREIKRILSIMGIPNIVFPDTTDVFDVPLTGEPGMYPKGGTPIGDIEDSASSAGTIAL CRMAGGSAAKILESKFKVPAKIGPTPIGIRNTDRFIMNAAKLANVAIPLELEDERGRLVDMMTDAHPHYHGKKVAIYGDP DIISGLTSLVMEMGMEPGVVLTGTQSSEFEKEVEGLTGSEYPEADIISGGDLFMLHQIIKRKPVDLLIGNTYGKFISRAE DVPLVRVGFPIMDRASLHYFPIMGYAGAARLVERIGNTLLDRKDRDAPDWLLETIQ >Mature_456_residues MLDYTPCEEITREAVTINPAKICQPIGAVYAALGVHNCMPHSHGSQGCLSYLRMCLSRHYRENPVATTSSFSEGTAVFGG AANLKEALGNLTAIYKPEVIAIHTTCVAETIGDDVGVIIEDVRAEELIDPSIKICAASTPSYVGTHITGYDNMVKSFVTI FARKTKPNGKLNLIPGFVEPGDIREIKRILSIMGIPNIVFPDTTDVFDVPLTGEPGMYPKGGTPIGDIEDSASSAGTIAL CRMAGGSAAKILESKFKVPAKIGPTPIGIRNTDRFIMNAAKLANVAIPLELEDERGRLVDMMTDAHPHYHGKKVAIYGDP DIISGLTSLVMEMGMEPGVVLTGTQSSEFEKEVEGLTGSEYPEADIISGGDLFMLHQIIKRKPVDLLIGNTYGKFISRAE DVPLVRVGFPIMDRASLHYFPIMGYAGAARLVERIGNTLLDRKDRDAPDWLLETIQ
Specific function: This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000510 - InterPro: IPR000318 - InterPro: IPR005976 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: =1.18.6.1 [H]
Molecular weight: Translated: 49308; Mature: 49308
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00699 NITROGENASE_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDYTPCEEITREAVTINPAKICQPIGAVYAALGVHNCMPHSHGSQGCLSYLRMCLSRHY CCCCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RENPVATTSSFSEGTAVFGGAANLKEALGNLTAIYKPEVIAIHTTCVAETIGDDVGVIIE CCCCCCCCCCCCCCCEEECCHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHCCCHHHHHH DVRAEELIDPSIKICAASTPSYVGTHITGYDNMVKSFVTIFARKTKPNGKLNLIPGFVEP HHHHHHHCCCCCEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC GDIREIKRILSIMGIPNIVFPDTTDVFDVPLTGEPGMYPKGGTPIGDIEDSASSAGTIAL CCHHHHHHHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE CRMAGGSAAKILESKFKVPAKIGPTPIGIRNTDRFIMNAAKLANVAIPLELEDERGRLVD EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCEEE MMTDAHPHYHGKKVAIYGDPDIISGLTSLVMEMGMEPGVVLTGTQSSEFEKEVEGLTGSE HHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCC YPEADIISGGDLFMLHQIIKRKPVDLLIGNTYGKFISRAEDVPLVRVGFPIMDRASLHYF CCCCCEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCEEE PIMGYAGAARLVERIGNTLLDRKDRDAPDWLLETIQ EHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure MLDYTPCEEITREAVTINPAKICQPIGAVYAALGVHNCMPHSHGSQGCLSYLRMCLSRHY CCCCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RENPVATTSSFSEGTAVFGGAANLKEALGNLTAIYKPEVIAIHTTCVAETIGDDVGVIIE CCCCCCCCCCCCCCCEEECCHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHCCCHHHHHH DVRAEELIDPSIKICAASTPSYVGTHITGYDNMVKSFVTIFARKTKPNGKLNLIPGFVEP HHHHHHHCCCCCEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCC GDIREIKRILSIMGIPNIVFPDTTDVFDVPLTGEPGMYPKGGTPIGDIEDSASSAGTIAL CCHHHHHHHHHHHCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE CRMAGGSAAKILESKFKVPAKIGPTPIGIRNTDRFIMNAAKLANVAIPLELEDERGRLVD EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCEEE MMTDAHPHYHGKKVAIYGDPDIISGLTSLVMEMGMEPGVVLTGTQSSEFEKEVEGLTGSE HHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCC YPEADIISGGDLFMLHQIIKRKPVDLLIGNTYGKFISRAEDVPLVRVGFPIMDRASLHYF CCCCCEECCCCHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCEEE PIMGYAGAARLVERIGNTLLDRKDRDAPDWLLETIQ EHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550408; 7961410 [H]