| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226136
Identifier: 21226136
GI number: 21226136
Start: 37836
End: 38780
Strand: Reverse
Name: 21226136
Synonym: MM_0034
Alternate gene names: NA
Gene position: 38780-37836 (Counterclockwise)
Preceding gene: 21226137
Following gene: 21226135
Centisome position: 0.95
GC content: 25.5
Gene sequence:
>945_bases TTGGAAACAATATTATATAGCCAAAAATGGCTTAAGATAACTAAAAATTTAGTTAACGTATTATTATTACTTATTTTCTT AACATTTATTTTTTGGGAAACTGGAACACTTAGGCTCGAAATATCTCCTATAACAACCACTTTGATGTCTATATGTTTGA TAGGGCTAGTTGAAATAGCTGGTGCAAACAGATGGATTTTGAAAAATAGATTTACTCGTGAAGCAAGAGCTAAGAAATTT TTTGATAATCTAAACTCAATGAAAAGTAAAGATATCAAAGCTGAAATGAAAACACAAAAATTTTCATCAAATTGTATTAA TTATTTATTTCGAAAAATTGAAAAAAATGATACTGAATACCCGCTTTATTTAATTAATTTGATTATAGAAAATCAATATT TGGACCAAAATAATTTAAATTTGTTATTCAGTTCTAAATTCTTTAAGGAACTCGATGAAAATACGATCAAGAAACTTTTG ATATCTAAAAGAGAGCGATTAACTCCTGAAAACATACAAACTATTTATGAGACTTTTGAAGATGAGGATGATATCGTTAA GATATTGGTTGCTTGTCAGTATAGTCGCTTCTTAATCAAAAAATACCCTGAGAACAAACGATTAACAAGTTATTATGAAA ATTATCATTTAAAAAATGAACATTTAACTTGGAAATTGAAGATATTTAGAGCTCCTTTGCCAGTAATTGAAAGAATTGAA GGTTTCTTTAATGTTCTAATTTTTTTCCTTTTAATCATTTATTATTTAAGTACCGTGTTCACTCCATCAACTACATATGA AAATATAACTCAATTTATTTCTATCATAACCGCATCAATTTTTGTAACATTTATATTTGATTTATTGTTATTTAACCAGC CTTACAAGTTTTTTTACAAGAAATATATTAATACATTTCTCGATAATGTTACAAAAAAGAAATAA
Upstream 100 bases:
>100_bases AGAGAATAGGATAAACAAACTTGAACAGATAAATAGTTCTGAAGATGACGAAAACTCTGTTATCTCTTTCGTTTTGGATA TATTCAATATAAGAAGACTT
Downstream 100 bases:
>100_bases GAAACATTCATCGCATGTAAAAAATCATATTAATAGCTTAAAAAGCAATTTGTTAACGTACTTATTTTATGTTTACAAGG TACTCACCGTATAATTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues METILYSQKWLKITKNLVNVLLLLIFLTFIFWETGTLRLEISPITTTLMSICLIGLVEIAGANRWILKNRFTREARAKKF FDNLNSMKSKDIKAEMKTQKFSSNCINYLFRKIEKNDTEYPLYLINLIIENQYLDQNNLNLLFSSKFFKELDENTIKKLL ISKRERLTPENIQTIYETFEDEDDIVKILVACQYSRFLIKKYPENKRLTSYYENYHLKNEHLTWKLKIFRAPLPVIERIE GFFNVLIFFLLIIYYLSTVFTPSTTYENITQFISIITASIFVTFIFDLLLFNQPYKFFYKKYINTFLDNVTKKK
Sequences:
>Translated_314_residues METILYSQKWLKITKNLVNVLLLLIFLTFIFWETGTLRLEISPITTTLMSICLIGLVEIAGANRWILKNRFTREARAKKF FDNLNSMKSKDIKAEMKTQKFSSNCINYLFRKIEKNDTEYPLYLINLIIENQYLDQNNLNLLFSSKFFKELDENTIKKLL ISKRERLTPENIQTIYETFEDEDDIVKILVACQYSRFLIKKYPENKRLTSYYENYHLKNEHLTWKLKIFRAPLPVIERIE GFFNVLIFFLLIIYYLSTVFTPSTTYENITQFISIITASIFVTFIFDLLLFNQPYKFFYKKYINTFLDNVTKKK >Mature_314_residues METILYSQKWLKITKNLVNVLLLLIFLTFIFWETGTLRLEISPITTTLMSICLIGLVEIAGANRWILKNRFTREARAKKF FDNLNSMKSKDIKAEMKTQKFSSNCINYLFRKIEKNDTEYPLYLINLIIENQYLDQNNLNLLFSSKFFKELDENTIKKLL ISKRERLTPENIQTIYETFEDEDDIVKILVACQYSRFLIKKYPENKRLTSYYENYHLKNEHLTWKLKIFRAPLPVIERIE GFFNVLIFFLLIIYYLSTVFTPSTTYENITQFISIITASIFVTFIFDLLLFNQPYKFFYKKYINTFLDNVTKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37636; Mature: 37636
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METILYSQKWLKITKNLVNVLLLLIFLTFIFWETGTLRLEISPITTTLMSICLIGLVEIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHH GANRWILKNRFTREARAKKFFDNLNSMKSKDIKAEMKTQKFSSNCINYLFRKIEKNDTEY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLYLINLIIENQYLDQNNLNLLFSSKFFKELDENTIKKLLISKRERLTPENIQTIYETFE HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC DEDDIVKILVACQYSRFLIKKYPENKRLTSYYENYHLKNEHLTWKLKIFRAPLPVIERIE CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHH GFFNVLIFFLLIIYYLSTVFTPSTTYENITQFISIITASIFVTFIFDLLLFNQPYKFFYK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KYINTFLDNVTKKK HHHHHHHHHHHCCC >Mature Secondary Structure METILYSQKWLKITKNLVNVLLLLIFLTFIFWETGTLRLEISPITTTLMSICLIGLVEIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHH GANRWILKNRFTREARAKKFFDNLNSMKSKDIKAEMKTQKFSSNCINYLFRKIEKNDTEY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLYLINLIIENQYLDQNNLNLLFSSKFFKELDENTIKKLLISKRERLTPENIQTIYETFE HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC DEDDIVKILVACQYSRFLIKKYPENKRLTSYYENYHLKNEHLTWKLKIFRAPLPVIERIE CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHH GFFNVLIFFLLIIYYLSTVFTPSTTYENITQFISIITASIFVTFIFDLLLFNQPYKFFYK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KYINTFLDNVTKKK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA