| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226137
Identifier: 21226137
GI number: 21226137
Start: 39205
End: 41862
Strand: Reverse
Name: 21226137
Synonym: MM_0035
Alternate gene names: NA
Gene position: 41862-39205 (Counterclockwise)
Preceding gene: 161485685
Following gene: 21226136
Centisome position: 1.02
GC content: 32.96
Gene sequence:
>2658_bases ATGGATGAATTAGGCGAAGATTTACACAAAGTAAGTACTGATAACAGTAGTGACGTAAAAAAATTTGCAGCAATCACCAT AAAATATTATTTTTTTTACATCCATAATCAAGATCAATTATGGACTGATTTAGTAAGACTTGCTTCAGATGAAAATAGCA ATGTTAGAAATAATGCAATTATTGCTATTGATTCCATTTACTCTATTGTAAAAAATAAAGATAGAGTTTGGTCTGATCTA GTAGTACTTAGTCGATCCAATTACGCTAATGTAAGAGAAGTTACAACAAAAATTCTCGTTTCTGTTTTTCCTCAAGTATC TAGCAAAGATGAAGCTTGGAAAGATTTGGGTAAATTGGCTTTAGAAGATGATTATGAAACTAAGCAAGTTGCAGCAAAAG TCATAGGATCAGTTTTTCCATATATTCCAGAAAAAAATGAAGCATGGGAACGCTTACGCAATTTGACGATAGACGAAGAC GTAAATGTGATAAGATCAGCAGTGAACGCGTTCCAATTTGTTTTTCCTTATTCTCCAAATAAAACAGAGACGTGGAAAGA ATTGCATTGCTTAGTTTATAATGATGATAACGAAGTAAGACAAATTACAGCAAAAGTCATTGGATCTGTTTTTCAACATA TTCCAGAAAAAAAAGAAGCATTGGAAGATTTACATAAATTGACATTAGACGACGATGTTAATGTGAAAAGATCAGCAGCA GCAGCCCTTGGATCTATCTTTCCTTATGCATCAGAACAAGAGAAAATTTGGACAGATCTAATGAAGCTTATTTCATATAA TGATACAATTGTTGAAAGCAATGCAAAGCACTCTTTTGAGTCTACTCTCGATTATCTGGTAGAAAAAGAAGGACTCTTTA AGAATTCACAACAAAATCTTTACGGAGAGAATGATGATGAAAACGAATGCAATGGAAGCTCTCTTACTACTGTTTTGTTA GACGTTCTCAATAAAGAAGATTCCTGGAATAATCTAACGAGCATAATTCATCACAAATCTTCAGAGAGTTGGAAAACTGC AATGAAGGTTATAACTTACATTTTTCCAGTTATTACCAACAAAATGCAAACATGGAATGATTTATATAAATGTGTCCAAA TTGGAAAAGAAGTTAACTATCTATTATCAGTCTTTGCATATGTCCCTGATAAAGAAAAGGCTTTAGAAGACTTAGTAAAA CTTAATTCAGAAATGGAAACTGAAAGAAAATGGGGATCGCTAATAGTATCTACAATTGAAGAGTTTATTAATAAACTTGA TAAAGAGCAAGTTTATAAAAGTCTGCAAAAGTTACTCCTAAGTGAAAACACCTATGTTAAAAAAACTACAATAAGTGTTT TAGTATCATTATTTCCTTCTCTTCCTGATAAGGATCACTTAAATTCTTTTTGTGACAAAGAACAGGCTTGGGAAGATCTT TTAGCATTGACATCTGAACGAGAAGAAGTATTAAAAAGACATGCGGCAACCGCACTTGGACTTGTTTTTCTACACGTACC TAACAAAAGTAGAGCTTGGAAAGACCTACACAAGCTAATTTCTAATATGCATTTTAACGTTAGACGGGGCATAGCCAGTT CTATTGGTTCTGCTTTTCCTTATGTTCCAAATAAAACACAAGCTTGGGAAGATCTAGTACAACTGACTTCAGATGAAAAA AACTATGTGAGAGTGAGCGCGTATCACTCAATGGGAAGGATTTCAATTTTTAAGGCATCTCAGTCAGAATCAGAAGACGA GTACAGAACGGAAGTAGAAAAAGCTATTGATTTTTTTGATAAAGCCTCAAAAGAACTTACTTACCATCCACCATCCAAAT TTTGCCTTCCATTTTACCGTTCATTTTACGCAATAGTTTTCGAAAAATATGAAACAGAGGAAGAAGTAGAGAAATACCTC CAAGAAGCAAAGGCTGAAATTGAAGAATCAAAAAATAAAAAAGTACTATTTGAAGTTATTAAATATCTTTCAATATTCTT AAAAGAATTTCAGAATATTGAAAGTATAGACTTGGAAGCTAAGAAAAAGAAACTTAGTTTGTGCAGGAAGTACTGTGAAC AAGCTGCTGAATTGATGAACGAAACTGAAATAACAGCACCTTTTGCTACGGCAACAATAAAAAAAGGTTTTCCAATTCTT AACAGGAAGCTAGAAGGCCTTCTCGAAGAAATCCAAGAAAAAGCAAAGACCGCGTGCCGGGAATCTCAAGGTACTGATAC AAAAGAAATCGCATGCGCTGTCAGTCGAGAAGTTCAGAAATGGGAAATTAGTAGTCAGGAGGAAATGACTGAACATGTCA AAACTCTTATTTTTTCTTTAGAGTCTGTGATTCCAAATAATGAAAATAATAAAAAAATTTATGAAAAAATTGAAGCTATA GGCAATGAAAAGGACCTTATAAAACAATATGAAATTTTATCATTAATTATTGCACTGATACCTAAGGCGCAAGTTGAGAC TCAAAGTAGAACTAGAGCAATAGAATCTTCTGCAACTATAGCAGGATTCGCAGGCTTTGCTATTCTGGAAATAGTAAATT CAGTTCATCCACTGGTTTCTTCTAATGATCACTTTATTTGCTTCTCAGTAGCAGTTCTAATATTTTTAATCGTTTTTGTA TTTACAAATAACAAATAA
Upstream 100 bases:
>100_bases AATACAAAGCGAAAATGAAAATGAGCGTATAAAAGCGCTTGAAATGCTAAGACATTACACTTACGATGATCTCCAGTTCA TTTATTTGCCTCTTTTTGAT
Downstream 100 bases:
>100_bases TTTGGCTCTATAGGTACCTGTTTTAATTGAGAAAAATATAGATTCCACATCTAGCTCTCCCTCAATCCTGTTATTCCCTC AGCAACCAGTCCTGTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 885; Mature: 885
Protein sequence:
>885_residues MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAIIAIDSIYSIVKNKDRVWSDL VVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLALEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDED VNVIRSAVNAFQFVFPYSPNKTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNLYGENDDENECNGSSLTTVLL DVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITNKMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVK LNSEMETERKWGSLIVSTIEEFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFPYVPNKTQAWEDLVQLTSDEK NYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFDKASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYL QEAKAEIEESKNKKVLFEVIKYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSLESVIPNNENNKKIYEKIEAI GNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATIAGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFV FTNNK
Sequences:
>Translated_885_residues MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAIIAIDSIYSIVKNKDRVWSDL VVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLALEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDED VNVIRSAVNAFQFVFPYSPNKTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNLYGENDDENECNGSSLTTVLL DVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITNKMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVK LNSEMETERKWGSLIVSTIEEFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFPYVPNKTQAWEDLVQLTSDEK NYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFDKASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYL QEAKAEIEESKNKKVLFEVIKYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSLESVIPNNENNKKIYEKIEAI GNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATIAGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFV FTNNK >Mature_885_residues MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAIIAIDSIYSIVKNKDRVWSDL VVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLALEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDED VNVIRSAVNAFQFVFPYSPNKTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNLYGENDDENECNGSSLTTVLL DVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITNKMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVK LNSEMETERKWGSLIVSTIEEFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFPYVPNKTQAWEDLVQLTSDEK NYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFDKASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYL QEAKAEIEESKNKKVLFEVIKYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSLESVIPNNENNKKIYEKIEAI GNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATIAGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFV FTNNK
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101552; Mature: 101552
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAI CCHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEE IAIDSIYSIVKNKDRVWSDLVVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLA EEHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDEDVNVIRSAVNAFQFVFPYSPN HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC KTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA CCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNL HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC YGENDDENECNGSSLTTVLLDVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITN CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVKLNSEMETERKWGSLIVSTIE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFP HHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC YVPNKTQAWEDLVQLTSDEKNYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFD CCCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYLQEAKAEIEESKNKKVLFEVI HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH KYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ESVIPNNENNKKIYEKIEAIGNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATI HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH AGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFVFTNNK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAI CCHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEE IAIDSIYSIVKNKDRVWSDLVVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLA EEHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDEDVNVIRSAVNAFQFVFPYSPN HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC KTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA CCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNL HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC YGENDDENECNGSSLTTVLLDVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITN CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVKLNSEMETERKWGSLIVSTIE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFP HHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC YVPNKTQAWEDLVQLTSDEKNYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFD CCCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYLQEAKAEIEESKNKKVLFEVI HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH KYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ESVIPNNENNKKIYEKIEAIGNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATI HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH AGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFVFTNNK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA