Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226137

Identifier: 21226137

GI number: 21226137

Start: 39205

End: 41862

Strand: Reverse

Name: 21226137

Synonym: MM_0035

Alternate gene names: NA

Gene position: 41862-39205 (Counterclockwise)

Preceding gene: 161485685

Following gene: 21226136

Centisome position: 1.02

GC content: 32.96

Gene sequence:

>2658_bases
ATGGATGAATTAGGCGAAGATTTACACAAAGTAAGTACTGATAACAGTAGTGACGTAAAAAAATTTGCAGCAATCACCAT
AAAATATTATTTTTTTTACATCCATAATCAAGATCAATTATGGACTGATTTAGTAAGACTTGCTTCAGATGAAAATAGCA
ATGTTAGAAATAATGCAATTATTGCTATTGATTCCATTTACTCTATTGTAAAAAATAAAGATAGAGTTTGGTCTGATCTA
GTAGTACTTAGTCGATCCAATTACGCTAATGTAAGAGAAGTTACAACAAAAATTCTCGTTTCTGTTTTTCCTCAAGTATC
TAGCAAAGATGAAGCTTGGAAAGATTTGGGTAAATTGGCTTTAGAAGATGATTATGAAACTAAGCAAGTTGCAGCAAAAG
TCATAGGATCAGTTTTTCCATATATTCCAGAAAAAAATGAAGCATGGGAACGCTTACGCAATTTGACGATAGACGAAGAC
GTAAATGTGATAAGATCAGCAGTGAACGCGTTCCAATTTGTTTTTCCTTATTCTCCAAATAAAACAGAGACGTGGAAAGA
ATTGCATTGCTTAGTTTATAATGATGATAACGAAGTAAGACAAATTACAGCAAAAGTCATTGGATCTGTTTTTCAACATA
TTCCAGAAAAAAAAGAAGCATTGGAAGATTTACATAAATTGACATTAGACGACGATGTTAATGTGAAAAGATCAGCAGCA
GCAGCCCTTGGATCTATCTTTCCTTATGCATCAGAACAAGAGAAAATTTGGACAGATCTAATGAAGCTTATTTCATATAA
TGATACAATTGTTGAAAGCAATGCAAAGCACTCTTTTGAGTCTACTCTCGATTATCTGGTAGAAAAAGAAGGACTCTTTA
AGAATTCACAACAAAATCTTTACGGAGAGAATGATGATGAAAACGAATGCAATGGAAGCTCTCTTACTACTGTTTTGTTA
GACGTTCTCAATAAAGAAGATTCCTGGAATAATCTAACGAGCATAATTCATCACAAATCTTCAGAGAGTTGGAAAACTGC
AATGAAGGTTATAACTTACATTTTTCCAGTTATTACCAACAAAATGCAAACATGGAATGATTTATATAAATGTGTCCAAA
TTGGAAAAGAAGTTAACTATCTATTATCAGTCTTTGCATATGTCCCTGATAAAGAAAAGGCTTTAGAAGACTTAGTAAAA
CTTAATTCAGAAATGGAAACTGAAAGAAAATGGGGATCGCTAATAGTATCTACAATTGAAGAGTTTATTAATAAACTTGA
TAAAGAGCAAGTTTATAAAAGTCTGCAAAAGTTACTCCTAAGTGAAAACACCTATGTTAAAAAAACTACAATAAGTGTTT
TAGTATCATTATTTCCTTCTCTTCCTGATAAGGATCACTTAAATTCTTTTTGTGACAAAGAACAGGCTTGGGAAGATCTT
TTAGCATTGACATCTGAACGAGAAGAAGTATTAAAAAGACATGCGGCAACCGCACTTGGACTTGTTTTTCTACACGTACC
TAACAAAAGTAGAGCTTGGAAAGACCTACACAAGCTAATTTCTAATATGCATTTTAACGTTAGACGGGGCATAGCCAGTT
CTATTGGTTCTGCTTTTCCTTATGTTCCAAATAAAACACAAGCTTGGGAAGATCTAGTACAACTGACTTCAGATGAAAAA
AACTATGTGAGAGTGAGCGCGTATCACTCAATGGGAAGGATTTCAATTTTTAAGGCATCTCAGTCAGAATCAGAAGACGA
GTACAGAACGGAAGTAGAAAAAGCTATTGATTTTTTTGATAAAGCCTCAAAAGAACTTACTTACCATCCACCATCCAAAT
TTTGCCTTCCATTTTACCGTTCATTTTACGCAATAGTTTTCGAAAAATATGAAACAGAGGAAGAAGTAGAGAAATACCTC
CAAGAAGCAAAGGCTGAAATTGAAGAATCAAAAAATAAAAAAGTACTATTTGAAGTTATTAAATATCTTTCAATATTCTT
AAAAGAATTTCAGAATATTGAAAGTATAGACTTGGAAGCTAAGAAAAAGAAACTTAGTTTGTGCAGGAAGTACTGTGAAC
AAGCTGCTGAATTGATGAACGAAACTGAAATAACAGCACCTTTTGCTACGGCAACAATAAAAAAAGGTTTTCCAATTCTT
AACAGGAAGCTAGAAGGCCTTCTCGAAGAAATCCAAGAAAAAGCAAAGACCGCGTGCCGGGAATCTCAAGGTACTGATAC
AAAAGAAATCGCATGCGCTGTCAGTCGAGAAGTTCAGAAATGGGAAATTAGTAGTCAGGAGGAAATGACTGAACATGTCA
AAACTCTTATTTTTTCTTTAGAGTCTGTGATTCCAAATAATGAAAATAATAAAAAAATTTATGAAAAAATTGAAGCTATA
GGCAATGAAAAGGACCTTATAAAACAATATGAAATTTTATCATTAATTATTGCACTGATACCTAAGGCGCAAGTTGAGAC
TCAAAGTAGAACTAGAGCAATAGAATCTTCTGCAACTATAGCAGGATTCGCAGGCTTTGCTATTCTGGAAATAGTAAATT
CAGTTCATCCACTGGTTTCTTCTAATGATCACTTTATTTGCTTCTCAGTAGCAGTTCTAATATTTTTAATCGTTTTTGTA
TTTACAAATAACAAATAA

Upstream 100 bases:

>100_bases
AATACAAAGCGAAAATGAAAATGAGCGTATAAAAGCGCTTGAAATGCTAAGACATTACACTTACGATGATCTCCAGTTCA
TTTATTTGCCTCTTTTTGAT

Downstream 100 bases:

>100_bases
TTTGGCTCTATAGGTACCTGTTTTAATTGAGAAAAATATAGATTCCACATCTAGCTCTCCCTCAATCCTGTTATTCCCTC
AGCAACCAGTCCTGTTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 885; Mature: 885

Protein sequence:

>885_residues
MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAIIAIDSIYSIVKNKDRVWSDL
VVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLALEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDED
VNVIRSAVNAFQFVFPYSPNKTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA
AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNLYGENDDENECNGSSLTTVLL
DVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITNKMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVK
LNSEMETERKWGSLIVSTIEEFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL
LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFPYVPNKTQAWEDLVQLTSDEK
NYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFDKASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYL
QEAKAEIEESKNKKVLFEVIKYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL
NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSLESVIPNNENNKKIYEKIEAI
GNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATIAGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFV
FTNNK

Sequences:

>Translated_885_residues
MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAIIAIDSIYSIVKNKDRVWSDL
VVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLALEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDED
VNVIRSAVNAFQFVFPYSPNKTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA
AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNLYGENDDENECNGSSLTTVLL
DVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITNKMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVK
LNSEMETERKWGSLIVSTIEEFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL
LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFPYVPNKTQAWEDLVQLTSDEK
NYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFDKASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYL
QEAKAEIEESKNKKVLFEVIKYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL
NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSLESVIPNNENNKKIYEKIEAI
GNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATIAGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFV
FTNNK
>Mature_885_residues
MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAIIAIDSIYSIVKNKDRVWSDL
VVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLALEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDED
VNVIRSAVNAFQFVFPYSPNKTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA
AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNLYGENDDENECNGSSLTTVLL
DVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITNKMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVK
LNSEMETERKWGSLIVSTIEEFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL
LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFPYVPNKTQAWEDLVQLTSDEK
NYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFDKASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYL
QEAKAEIEESKNKKVLFEVIKYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL
NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSLESVIPNNENNKKIYEKIEAI
GNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATIAGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFV
FTNNK

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101552; Mature: 101552

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAI
CCHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEE
IAIDSIYSIVKNKDRVWSDLVVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLA
EEHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDEDVNVIRSAVNAFQFVFPYSPN
HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
KTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA
CCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNL
HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
YGENDDENECNGSSLTTVLLDVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITN
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVKLNSEMETERKWGSLIVSTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFP
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
YVPNKTQAWEDLVQLTSDEKNYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFD
CCCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
KASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYLQEAKAEIEESKNKKVLFEVI
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL
HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH
NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ESVIPNNENNKKIYEKIEAIGNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATI
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
AGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFVFTNNK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDELGEDLHKVSTDNSSDVKKFAAITIKYYFFYIHNQDQLWTDLVRLASDENSNVRNNAI
CCHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCEE
IAIDSIYSIVKNKDRVWSDLVVLSRSNYANVREVTTKILVSVFPQVSSKDEAWKDLGKLA
EEHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LEDDYETKQVAAKVIGSVFPYIPEKNEAWERLRNLTIDEDVNVIRSAVNAFQFVFPYSPN
HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
KTETWKELHCLVYNDDNEVRQITAKVIGSVFQHIPEKKEALEDLHKLTLDDDVNVKRSAA
CCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
AALGSIFPYASEQEKIWTDLMKLISYNDTIVESNAKHSFESTLDYLVEKEGLFKNSQQNL
HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
YGENDDENECNGSSLTTVLLDVLNKEDSWNNLTSIIHHKSSESWKTAMKVITYIFPVITN
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KMQTWNDLYKCVQIGKEVNYLLSVFAYVPDKEKALEDLVKLNSEMETERKWGSLIVSTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFINKLDKEQVYKSLQKLLLSENTYVKKTTISVLVSLFPSLPDKDHLNSFCDKEQAWEDL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LALTSEREEVLKRHAATALGLVFLHVPNKSRAWKDLHKLISNMHFNVRRGIASSIGSAFP
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
YVPNKTQAWEDLVQLTSDEKNYVRVSAYHSMGRISIFKASQSESEDEYRTEVEKAIDFFD
CCCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
KASKELTYHPPSKFCLPFYRSFYAIVFEKYETEEEVEKYLQEAKAEIEESKNKKVLFEVI
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KYLSIFLKEFQNIESIDLEAKKKKLSLCRKYCEQAAELMNETEITAPFATATIKKGFPIL
HHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHH
NRKLEGLLEEIQEKAKTACRESQGTDTKEIACAVSREVQKWEISSQEEMTEHVKTLIFSL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ESVIPNNENNKKIYEKIEAIGNEKDLIKQYEILSLIIALIPKAQVETQSRTRAIESSATI
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
AGFAGFAILEIVNSVHPLVSSNDHFICFSVAVLIFLIVFVFTNNK
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA