| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226135
Identifier: 21226135
GI number: 21226135
Start: 36987
End: 37358
Strand: Reverse
Name: 21226135
Synonym: MM_0033
Alternate gene names: NA
Gene position: 37358-36987 (Counterclockwise)
Preceding gene: 21226136
Following gene: 21226132
Centisome position: 0.91
GC content: 37.63
Gene sequence:
>372_bases ATGATGCTGTATAGTGATGTTTTTATGCAAGAAAGGAAAGTCAAAATTATGGACTTCACAGGGGAATGGCACATTTATGA GATGGAACAATCGGATGAGGACTATTTCAATATGGACGTTCAGGCTTATATTATGATAGAACCAGACAACATGGGGCATT TTCAGTTTGGCTTAGTTTATGGTGATATCGACGGAAGAATCGTTGAATATGCCGATGGCAAAAGATTTGAATTCACCTTT GAAGGAAATGAGGAGTGCGACCATGTTTTTGGTAGTGGTTGGGTAAAAATTAAAGAAAAAGACGTACTTGAAGGCGAGTT TAGATTTCATCTTGGAGATAGTTCTACCTTTTTAGCAAGGAGAGCAAAGTAA
Upstream 100 bases:
>100_bases ACAGAAAAAGAATTACTTTAATCTGAAATCCAGCCTTGCGAAATGCCCCTTCTAAATCTGCAATTTAACTGAATGAATAA CCTTCTAAAGATTCAAGTTC
Downstream 100 bases:
>100_bases AATCAAGTTATCTAAAAACGGGCTGCAGAATGTCTCTCTTAAATCTTTAAAAATCACGGTTTTTTCAATTTCGCTTTTCT TAACTTTATCTTAACAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MMLYSDVFMQERKVKIMDFTGEWHIYEMEQSDEDYFNMDVQAYIMIEPDNMGHFQFGLVYGDIDGRIVEYADGKRFEFTF EGNEECDHVFGSGWVKIKEKDVLEGEFRFHLGDSSTFLARRAK
Sequences:
>Translated_123_residues MMLYSDVFMQERKVKIMDFTGEWHIYEMEQSDEDYFNMDVQAYIMIEPDNMGHFQFGLVYGDIDGRIVEYADGKRFEFTF EGNEECDHVFGSGWVKIKEKDVLEGEFRFHLGDSSTFLARRAK >Mature_123_residues MMLYSDVFMQERKVKIMDFTGEWHIYEMEQSDEDYFNMDVQAYIMIEPDNMGHFQFGLVYGDIDGRIVEYADGKRFEFTF EGNEECDHVFGSGWVKIKEKDVLEGEFRFHLGDSSTFLARRAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14614; Mature: 14614
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLYSDVFMQERKVKIMDFTGEWHIYEMEQSDEDYFNMDVQAYIMIEPDNMGHFQFGLVY CEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEE GDIDGRIVEYADGKRFEFTFEGNEECDHVFGSGWVKIKEKDVLEGEFRFHLGDSSTFLAR ECCCCEEEEECCCCEEEEEECCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCEEEEE RAK ECC >Mature Secondary Structure MMLYSDVFMQERKVKIMDFTGEWHIYEMEQSDEDYFNMDVQAYIMIEPDNMGHFQFGLVY CEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCEEECCEEEEEEECCCCCCCEEEEEEE GDIDGRIVEYADGKRFEFTFEGNEECDHVFGSGWVKIKEKDVLEGEFRFHLGDSSTFLAR ECCCCEEEEECCCCEEEEEECCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCEEEEE RAK ECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA