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The map label for this gene is PqqL3 [H]

Identifier: 20808083

GI number: 20808083

Start: 1607396

End: 1608661

Strand: Reverse

Name: PqqL3 [H]

Synonym: TTE1656

Alternate gene names: 20808083

Gene position: 1608661-1607396 (Counterclockwise)

Preceding gene: 20808084

Following gene: 20808082

Centisome position: 59.81

GC content: 35.78

Gene sequence:

>1266_bases
ATGGAGCTTATACATAAAGAGCTAGGAGATGGGATAAATCTATACCTAGATGTTACGGACAAGTTTAAAACGGTGACGGT
AAATCTCTACGTGCAGAACAAATTGGGAGATGAAGCGACTTGGTATGCGCTTATACCTTCTGTTTTAAAAAGGGGGACTT
CCGCCCTTAAAACTTACAAAGATATGGTAAAGTATCTAGAAATGCTTTATGGCACTACTATGGCTGTATCAGTATACAAA
AAAGGAGAAAGGCATTTCCAACAGTACAGATTGGAATTGCCGCAAGAGGAATATGTAAGTGAAAATGTATTTGAAAAAGG
GATAAAATTTTTGTATGAATTGGTTTTTGAACCTTTTACGCAGGATGGAGCATTTTTGAAGGAATATGTGTTACAGGAGA
AGGAAGTGCAGAAGAATTTGATAGAGTCAAGGATAAATGACAAGACCAAATATGCAGTTGACCGCTGCTATGAAGAAATG
TGCAAAGGAGAGCCTTTTGCAATTTTTGAATTGGGTAAGAAGGAAGACCTGGACTTGATAGACGAGAAAAACCTTTTTGA
ATATTACAAAAAGTGTATTGACACATTGCCAGTAGATATATATGTGGTGGGGAATGTAAATCCTGAATATGCCGAAGAAG
TTTTTAGGAAGTATTTCAATTTAAGAAGAAAAGAGGTTTTAGAAATTCCTTTTACAGATGTTAGAAAGGAAGTAAAGGAA
GTAAAGTACGTTACAGAAGAGCTTGATGTAAATCAAGGGAAGCTCACATTAGGTTTTAGGACAAATGTACCTCCGGACAG
CGAAGAATATTACCCTCTTTTAGTATACAGCACTGTTTTAGGAGGAGGTCCTTTTTCCAAGCTTTTTATTAATGTTAGAG
AAAAGGCAAGTCTTGCTTATTACGCTTATTCGCGTCTTGAAAGGTTTAAAGGACTTATGGTGATAAGTTCAGGAATTGAA
GTGGAAAATTACAGCAAAGCCCTTGATATAATCCTTAAAGAGGTCGGAGAGATGGAAAAGGGTAATATATCAGATTATGA
ATTTGACTCTGCCAAAAAGTCCTTATACACTTCGCTGAATGCTATAAAAGACAATGCAACTTCAAAAGCAGACTACTATC
TTTCCCAAAAGATAGCAGGGACAAATTTAGGAATAGAGGAATTCATAAAGAAAATAGAGAAAGTCAGTAAAGAAGACGTA
GTAGAAGTATCTAAAAAAGTGAAATTGGATACGGTTTACTTCATGAGGAATAAAAAGGAGGCATAA

Upstream 100 bases:

>100_bases
GTAAAAACCTGGGGGTTTCCCCGGGTTTATGTATTATCAAATTTGTGATACAATTATCGTGTGATGAAGTATCTGGATTA
TTTTAGAAGGAGTTGATCTG

Downstream 100 bases:

>100_bases
ACAGTGCAGCAGGTTTATGATGAAAAGGTCAGAGAGAAGATTTTGTTTGAAGAGCTTGAAAATGGACTTAAAGTTTATGT
GATGCCTAAGAAAGGATATA

Product: Zn-dependent peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MELIHKELGDGINLYLDVTDKFKTVTVNLYVQNKLGDEATWYALIPSVLKRGTSALKTYKDMVKYLEMLYGTTMAVSVYK
KGERHFQQYRLELPQEEYVSENVFEKGIKFLYELVFEPFTQDGAFLKEYVLQEKEVQKNLIESRINDKTKYAVDRCYEEM
CKGEPFAIFELGKKEDLDLIDEKNLFEYYKKCIDTLPVDIYVVGNVNPEYAEEVFRKYFNLRRKEVLEIPFTDVRKEVKE
VKYVTEELDVNQGKLTLGFRTNVPPDSEEYYPLLVYSTVLGGGPFSKLFINVREKASLAYYAYSRLERFKGLMVISSGIE
VENYSKALDIILKEVGEMEKGNISDYEFDSAKKSLYTSLNAIKDNATSKADYYLSQKIAGTNLGIEEFIKKIEKVSKEDV
VEVSKKVKLDTVYFMRNKKEA

Sequences:

>Translated_421_residues
MELIHKELGDGINLYLDVTDKFKTVTVNLYVQNKLGDEATWYALIPSVLKRGTSALKTYKDMVKYLEMLYGTTMAVSVYK
KGERHFQQYRLELPQEEYVSENVFEKGIKFLYELVFEPFTQDGAFLKEYVLQEKEVQKNLIESRINDKTKYAVDRCYEEM
CKGEPFAIFELGKKEDLDLIDEKNLFEYYKKCIDTLPVDIYVVGNVNPEYAEEVFRKYFNLRRKEVLEIPFTDVRKEVKE
VKYVTEELDVNQGKLTLGFRTNVPPDSEEYYPLLVYSTVLGGGPFSKLFINVREKASLAYYAYSRLERFKGLMVISSGIE
VENYSKALDIILKEVGEMEKGNISDYEFDSAKKSLYTSLNAIKDNATSKADYYLSQKIAGTNLGIEEFIKKIEKVSKEDV
VEVSKKVKLDTVYFMRNKKEA
>Mature_421_residues
MELIHKELGDGINLYLDVTDKFKTVTVNLYVQNKLGDEATWYALIPSVLKRGTSALKTYKDMVKYLEMLYGTTMAVSVYK
KGERHFQQYRLELPQEEYVSENVFEKGIKFLYELVFEPFTQDGAFLKEYVLQEKEVQKNLIESRINDKTKYAVDRCYEEM
CKGEPFAIFELGKKEDLDLIDEKNLFEYYKKCIDTLPVDIYVVGNVNPEYAEEVFRKYFNLRRKEVLEIPFTDVRKEVKE
VKYVTEELDVNQGKLTLGFRTNVPPDSEEYYPLLVYSTVLGGGPFSKLFINVREKASLAYYAYSRLERFKGLMVISSGIE
VENYSKALDIILKEVGEMEKGNISDYEFDSAKKSLYTSLNAIKDNATSKADYYLSQKIAGTNLGIEEFIKKIEKVSKEDV
VEVSKKVKLDTVYFMRNKKEA

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48936; Mature: 48936

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIHKELGDGINLYLDVTDKFKTVTVNLYVQNKLGDEATWYALIPSVLKRGTSALKTYK
CCCHHHHHCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DMVKYLEMLYGTTMAVSVYKKGERHFQQYRLELPQEEYVSENVFEKGIKFLYELVFEPFT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
QDGAFLKEYVLQEKEVQKNLIESRINDKTKYAVDRCYEEMCKGEPFAIFELGKKEDLDLI
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
DEKNLFEYYKKCIDTLPVDIYVVGNVNPEYAEEVFRKYFNLRRKEVLEIPFTDVRKEVKE
CCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
VKYVTEELDVNQGKLTLGFRTNVPPDSEEYYPLLVYSTVLGGGPFSKLFINVREKASLAY
HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHH
YAYSRLERFKGLMVISSGIEVENYSKALDIILKEVGEMEKGNISDYEFDSAKKSLYTSLN
HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
AIKDNATSKADYYLSQKIAGTNLGIEEFIKKIEKVSKEDVVEVSKKVKLDTVYFMRNKKE
HHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEECCCCC
A
C
>Mature Secondary Structure
MELIHKELGDGINLYLDVTDKFKTVTVNLYVQNKLGDEATWYALIPSVLKRGTSALKTYK
CCCHHHHHCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
DMVKYLEMLYGTTMAVSVYKKGERHFQQYRLELPQEEYVSENVFEKGIKFLYELVFEPFT
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
QDGAFLKEYVLQEKEVQKNLIESRINDKTKYAVDRCYEEMCKGEPFAIFELGKKEDLDLI
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
DEKNLFEYYKKCIDTLPVDIYVVGNVNPEYAEEVFRKYFNLRRKEVLEIPFTDVRKEVKE
CCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHH
VKYVTEELDVNQGKLTLGFRTNVPPDSEEYYPLLVYSTVLGGGPFSKLFINVREKASLAY
HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHEEHHHHCCCCHHHHHHHHHHHHHHHH
YAYSRLERFKGLMVISSGIEVENYSKALDIILKEVGEMEKGNISDYEFDSAKKSLYTSLN
HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
AIKDNATSKADYYLSQKIAGTNLGIEEFIKKIEKVSKEDVVEVSKKVKLDTVYFMRNKKE
HHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEECCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]