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The map label for this gene is yhcN [H]

Identifier: 20808084

GI number: 20808084

Start: 1608758

End: 1609273

Strand: Reverse

Name: yhcN [H]

Synonym: TTE1657

Alternate gene names: 20808084

Gene position: 1609273-1608758 (Counterclockwise)

Preceding gene: 20808086

Following gene: 20808083

Centisome position: 59.84

GC content: 47.09

Gene sequence:

>516_bases
ATGATTCTGACGTCAATGGCAGGGTGTAAGACTGCTACAAAAAAGCCTGCTCCTGCAAGGTACACTCCTACGCCTACAAG
GCCAGCGCCGGCACCTTCAAAGGCTACTCCAACGCCGGGATATACTACACCTGCGCCAACAGCTCCTACAGCTCCGACAC
CTGCGCCTGTTAGAAAGCCAACTACAGAGAGCATGAGGGCTTCAAGGGTTGCGACAAGTGTGGCTAGAATTCCCGAAGTC
AATAAGGCTACTGTCGTCATATCAGGTACGACTGCTCTTGTAGGAGTGGACATGAAGGCAAAGGTTCAGGGAACTCACGA
AAAGGATGTAAAGAAGAAAATAGAAAAAGCAGTAAAAGATACAGATAAGTCTATAACAAGAGTGTATGTGACTGCTGACC
CGGACCTTTATAAAAGGATTGACAATATAGCGAGGGGAATTTCTGAAGGAAGGCCTGTGTCGGAGTTTGCAAAGCAAATT
TCTGAGATAATCAAACGCATCACTCCTGGCATGTAA

Upstream 100 bases:

>100_bases
AGCATAATACTTTTTTATAAACGTGCAAAAATATATTTTGAGGAGGTGTATAGCATTGAAAAAGATAAAAAATATAATAA
CCGTTTTGCTGATAGGTGTA

Downstream 100 bases:

>100_bases
AAACCTGGGGGTTTCCCCGGGTTTATGTATTATCAAATTTGTGATACAATTATCGTGTGATGAAGTATCTGGATTATTTT
AGAAGGAGTTGATCTGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MILTSMAGCKTATKKPAPARYTPTPTRPAPAPSKATPTPGYTTPAPTAPTAPTPAPVRKPTTESMRASRVATSVARIPEV
NKATVVISGTTALVGVDMKAKVQGTHEKDVKKKIEKAVKDTDKSITRVYVTADPDLYKRIDNIARGISEGRPVSEFAKQI
SEIIKRITPGM

Sequences:

>Translated_171_residues
MILTSMAGCKTATKKPAPARYTPTPTRPAPAPSKATPTPGYTTPAPTAPTAPTPAPVRKPTTESMRASRVATSVARIPEV
NKATVVISGTTALVGVDMKAKVQGTHEKDVKKKIEKAVKDTDKSITRVYVTADPDLYKRIDNIARGISEGRPVSEFAKQI
SEIIKRITPGM
>Mature_171_residues
MILTSMAGCKTATKKPAPARYTPTPTRPAPAPSKATPTPGYTTPAPTAPTAPTPAPVRKPTTESMRASRVATSVARIPEV
NKATVVISGTTALVGVDMKAKVQGTHEKDVKKKIEKAVKDTDKSITRVYVTADPDLYKRIDNIARGISEGRPVSEFAKQI
SEIIKRITPGM

Specific function: Plays a role, either directly or indirectly, in spore outgrowth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore inner membrane; Lipid-anchor (Probable). Note=Expressed in the forespore. Attached to the inner spore membrane by a lipid anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014247
- InterPro:   IPR019076 [H]

Pfam domain/function: PF09580 Spore_YhcN_YlaJ [H]

EC number: NA

Molecular weight: Translated: 18207; Mature: 18207

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTSMAGCKTATKKPAPARYTPTPTRPAPAPSKATPTPGYTTPAPTAPTAPTPAPVRKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTESMRASRVATSVARIPEVNKATVVISGTTALVGVDMKAKVQGTHEKDVKKKIEKAVKD
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCEECCCCCHHHHHHHHHHHHHH
TDKSITRVYVTADPDLYKRIDNIARGISEGRPVSEFAKQISEIIKRITPGM
CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILTSMAGCKTATKKPAPARYTPTPTRPAPAPSKATPTPGYTTPAPTAPTAPTPAPVRKP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTESMRASRVATSVARIPEVNKATVVISGTTALVGVDMKAKVQGTHEKDVKKKIEKAVKD
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCEECCCCCHHHHHHHHHHHHHH
TDKSITRVYVTADPDLYKRIDNIARGISEGRPVSEFAKQISEIIKRITPGM
CCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377; 9611260 [H]