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The map label for this gene is RpsA [H]

Identifier: 20807800

GI number: 20807800

Start: 1334375

End: 1335478

Strand: Direct

Name: RpsA [H]

Synonym: TTE1353

Alternate gene names: 20807800

Gene position: 1334375-1335478 (Clockwise)

Preceding gene: 20807799

Following gene: 20807801

Centisome position: 49.62

GC content: 35.51

Gene sequence:

>1104_bases
ATGAGAATGAATGATTTTTTAGAAGGGTATGTTTTTAGGCCCATTAAGGCGGGAGACATTGTGAAAGGCAAGGTAGTAAA
AGTACTGGAAGATGGAGTTGTTGCAGACATAGGATATAAAGGAGAAGCCTTTGTGCCCAAAGAAGAACTCTCTTTAAATC
CCGAATTTGACGTGCTTTCTAATTTTCATGAAGGAGAAGAGCTTGATTTATATATAGTGATGGTAGAAAACGAAGAGGGA
AGCGTTGTTGCTTCAAAGATTAAAGCAGAAGAGAAATTAGGGGAAGAAAAAATTGAGAAAGCCTATAAAAATAGAGAGAT
AGTAAAAGGGGAAGTTGTTAAGGTTGTAAAGGGAGGAGTTATTGCTTATTCTTTAGGTAAAAGGCTATTTATACCTGCTT
CCCATCTTTCAACAAAAAGAGTGGAAAATTTGGAAGAGTACTTGGGAAAAATATTAGAACTTCTAATAATTGAATATGTT
CCTGGCAAAAAAATTATAGCTTCCCGCAAAGAAGTCATCAAATTAGAAGAGGAAAAGATGAAGGCTGAGCTTCTTGAAAG
GCTTGAAGAAGGGGATGTAATAGAGGGGAAAGTCAGCAGGATAATACCAAAGGGAGCTTTTGTGAATTTGGGAGGAATGG
ATGGATTTATACCCATAAGTGAGTTAGGGCATGGAAGGATTAAATCTCCTGAAGAAGTAATAAAACCTGGTCATAAAGTG
TCTGCATATGTGCTTAAAGTGGATAAAAAAGAAGGAAAGATTACTTTAAGCCTTAAAAAACTTCTACCAAACCCATGGGA
AAATGTGAAGGAAAAGTATCACGAAGGAGATATTTTAAAAGCCAAGATTACTCGGATTATGCCTTTTGGCGTATTTGCAG
AACTAGAGCCTGGAGTTGAAGGTTTGGTGCACAAAAATAATTTAGAAAAAAGTATCAAATCTTATTCTCCAGAGGATATT
ATAACAGTAGAAGTATTGGAAGTATCCTCCGATAGAATAAGCTTAAAAGAAGTGCCTCCTTTTGAAGGGGAAGATGATAT
AAAGCAAACTGAATACCAGGAATTAACAATAAACTTGGGAGAAATTTTGAAGAAAAAATTTTAG

Upstream 100 bases:

>100_bases
TTAAAAGGGCATGATATTATCGGCATAACCGCTGGAGCTTCTACACCTGATTATGTGATTGAAGAAGTCATAGAGAAAAT
TAAATCATTAAAAGGAGAAG

Downstream 100 bases:

>100_bases
TTATGTCATGTAAAAAGCCTTGACAAAACAAAAAAATCTGATAAAATTAAACTGTCATGTAAAAAGCCTTGACAAAAGAG
AAAAATTTGATAAAATTAAA

Product: ribosomal protein S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRMNDFLEGYVFRPIKAGDIVKGKVVKVLEDGVVADIGYKGEAFVPKEELSLNPEFDVLSNFHEGEELDLYIVMVENEEG
SVVASKIKAEEKLGEEKIEKAYKNREIVKGEVVKVVKGGVIAYSLGKRLFIPASHLSTKRVENLEEYLGKILELLIIEYV
PGKKIIASRKEVIKLEEEKMKAELLERLEEGDVIEGKVSRIIPKGAFVNLGGMDGFIPISELGHGRIKSPEEVIKPGHKV
SAYVLKVDKKEGKITLSLKKLLPNPWENVKEKYHEGDILKAKITRIMPFGVFAELEPGVEGLVHKNNLEKSIKSYSPEDI
ITVEVLEVSSDRISLKEVPPFEGEDDIKQTEYQELTINLGEILKKKF

Sequences:

>Translated_367_residues
MRMNDFLEGYVFRPIKAGDIVKGKVVKVLEDGVVADIGYKGEAFVPKEELSLNPEFDVLSNFHEGEELDLYIVMVENEEG
SVVASKIKAEEKLGEEKIEKAYKNREIVKGEVVKVVKGGVIAYSLGKRLFIPASHLSTKRVENLEEYLGKILELLIIEYV
PGKKIIASRKEVIKLEEEKMKAELLERLEEGDVIEGKVSRIIPKGAFVNLGGMDGFIPISELGHGRIKSPEEVIKPGHKV
SAYVLKVDKKEGKITLSLKKLLPNPWENVKEKYHEGDILKAKITRIMPFGVFAELEPGVEGLVHKNNLEKSIKSYSPEDI
ITVEVLEVSSDRISLKEVPPFEGEDDIKQTEYQELTINLGEILKKKF
>Mature_367_residues
MRMNDFLEGYVFRPIKAGDIVKGKVVKVLEDGVVADIGYKGEAFVPKEELSLNPEFDVLSNFHEGEELDLYIVMVENEEG
SVVASKIKAEEKLGEEKIEKAYKNREIVKGEVVKVVKGGVIAYSLGKRLFIPASHLSTKRVENLEEYLGKILELLIIEYV
PGKKIIASRKEVIKLEEEKMKAELLERLEEGDVIEGKVSRIIPKGAFVNLGGMDGFIPISELGHGRIKSPEEVIKPGHKV
SAYVLKVDKKEGKITLSLKKLLPNPWENVKEKYHEGDILKAKITRIMPFGVFAELEPGVEGLVHKNNLEKSIKSYSPEDI
ITVEVLEVSSDRISLKEVPPFEGEDDIKQTEYQELTINLGEILKKKF

Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 S1 motif domains [H]

Homologues:

Organism=Escherichia coli, GI1787140, Length=306, Percent_Identity=33.9869281045752, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: 16,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003451
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF02401 LYTB; PF00575 S1 [H]

EC number: =1.17.1.2 [H]

Molecular weight: Translated: 41253; Mature: 41253

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNDFLEGYVFRPIKAGDIVKGKVVKVLEDGVVADIGYKGEAFVPKEELSLNPEFDVLS
CCCHHHHCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCHHHHH
NFHEGEELDLYIVMVENEEGSVVASKIKAEEKLGEEKIEKAYKNREIVKGEVVKVVKGGV
CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCE
IAYSLGKRLFIPASHLSTKRVENLEEYLGKILELLIIEYVPGKKIIASRKEVIKLEEEKM
EEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KAELLERLEEGDVIEGKVSRIIPKGAFVNLGGMDGFIPISELGHGRIKSPEEVIKPGHKV
HHHHHHHHHCCCEECCHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCCCCHHHHCCCCCE
SAYVLKVDKKEGKITLSLKKLLPNPWENVKEKYHEGDILKAKITRIMPFGVFAELEPGVE
EEEEEEEECCCCEEEEEEHHHCCCHHHHHHHHHCCCCEEHHHHHHHCCCCCEEECCCCHH
GLVHKNNLEKSIKSYSPEDIITVEVLEVSSDRISLKEVPPFEGEDDIKQTEYQELTINLG
HHEEHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHEECHH
EILKKKF
HHHHHCC
>Mature Secondary Structure
MRMNDFLEGYVFRPIKAGDIVKGKVVKVLEDGVVADIGYKGEAFVPKEELSLNPEFDVLS
CCCHHHHCCEEECCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCHHHHH
NFHEGEELDLYIVMVENEEGSVVASKIKAEEKLGEEKIEKAYKNREIVKGEVVKVVKGGV
CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCE
IAYSLGKRLFIPASHLSTKRVENLEEYLGKILELLIIEYVPGKKIIASRKEVIKLEEEKM
EEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KAELLERLEEGDVIEGKVSRIIPKGAFVNLGGMDGFIPISELGHGRIKSPEEVIKPGHKV
HHHHHHHHHCCCEECCHHHHHCCCCCEEEECCCCCCCCHHHCCCCCCCCCHHHHCCCCCE
SAYVLKVDKKEGKITLSLKKLLPNPWENVKEKYHEGDILKAKITRIMPFGVFAELEPGVE
EEEEEEEECCCCEEEEEEHHHCCCHHHHHHHHHCCCCEEHHHHHHHCCCCCEEECCCCHH
GLVHKNNLEKSIKSYSPEDIITVEVLEVSSDRISLKEVPPFEGEDDIKQTEYQELTINLG
HHEEHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHEECHH
EILKKKF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]