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The map label for this gene is csoR [H]

Identifier: 20807684

GI number: 20807684

Start: 1234662

End: 1234928

Strand: Direct

Name: csoR [H]

Synonym: TTE1232

Alternate gene names: 20807684

Gene position: 1234662-1234928 (Clockwise)

Preceding gene: 20807683

Following gene: 20807685

Centisome position: 45.91

GC content: 41.57

Gene sequence:

>267_bases
ATGTACGAAGAAAGTAGAGAAGACCTTTTAAGGCGGCTGAAGAAGATAGAGGGTCAGGTAAAAGGCATACAGAAGATGAT
AGAGAATGATGCTTACTGCATTGACGTCTTAATACAGGTGGCTGCTGTTCGTTCTGCTATAAACAGCGTAGCTAAAATCC
TGCTAAAAAGCTATACTAGTAGCTGTATAAAAGGAGCCATGTGCGCTGAAAAGCAGGAGGAGATGGTGGACGATTTAGTG
GAGACTTTTATAAAGTTCATGAGGTAG

Upstream 100 bases:

>100_bases
GTTTTTTATTAATTAAAAAAATAACGAAAAGCTATTGACATATCTATGAAAAAATTTTATACTATTCTTTGGATACCCCA
CTGGGGTTGGGAGGTATAGT

Downstream 100 bases:

>100_bases
TTTTAAAAAGCATTTTGCTTTTAAAATGCATAAAGCAATTGCTTTGTACAAAAATAAAAATGAAATAAAAGTATAGGAGT
GGTTTTATGGCAGAAGTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MYEESREDLLRRLKKIEGQVKGIQKMIENDAYCIDVLIQVAAVRSAINSVAKILLKSYTSSCIKGAMCAEKQEEMVDDLV
ETFIKFMR

Sequences:

>Translated_88_residues
MYEESREDLLRRLKKIEGQVKGIQKMIENDAYCIDVLIQVAAVRSAINSVAKILLKSYTSSCIKGAMCAEKQEEMVDDLV
ETFIKFMR
>Mature_88_residues
MYEESREDLLRRLKKIEGQVKGIQKMIENDAYCIDVLIQVAAVRSAINSVAKILLKSYTSSCIKGAMCAEKQEEMVDDLV
ETFIKFMR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10078; Mature: 10078

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEESREDLLRRLKKIEGQVKGIQKMIENDAYCIDVLIQVAAVRSAINSVAKILLKSYTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCIKGAMCAEKQEEMVDDLVETFIKFMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MYEESREDLLRRLKKIEGQVKGIQKMIENDAYCIDVLIQVAAVRSAINSVAKILLKSYTS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCIKGAMCAEKQEEMVDDLVETFIKFMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]