| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is GdhA [H]
Identifier: 20807660
GI number: 20807660
Start: 1204764
End: 1206005
Strand: Direct
Name: GdhA [H]
Synonym: TTE1205
Alternate gene names: 20807660
Gene position: 1204764-1206005 (Clockwise)
Preceding gene: 20807659
Following gene: 20807661
Centisome position: 44.8
GC content: 40.34
Gene sequence:
>1242_bases ATGGCAGTTAATCCTTTAAAGGCTGTTCAAGAACAGATAAAAAATGCTTGTGAACTTCTCAATTTAGAAGAATCAGTCTA TGAGATATTAAAAGAGCCTCTCAGAGTAATGGAAGTTTCCATTCCCGTACAGATGGACGATGGAACAGTGAAGGTATTTA AAGGTTACAGGTCACAGCACAACGATGCCCTTGGACCTGCAAAAGGGGGAATAAGATTTCATCCGGACGTTACACTTGAT GAAGTAAAAGCTCTTTCTATGTGGATGACCTTTAAATGCGGTGTAGTTGGGCTTCCATACGGCGGAGGAAAAGGAGGAGT AGCAGTTAATCCTCAAGAACTTTCACCAACAGAACTAGAAAGATTGAGTAGAGGTTATATTCGGGCAATTTCCAGTATAA TAGGGCCTGAAAAGGATATACCAGCACCTGACGTAGGTACAAATGCTCAAGTGATGGCATGGATGGTAGATGAGTATAAC AAAATAGTCGGTTATAATAGTCCGGCAGTTATAACAGGAAAACCTTTGATATACGGGGGTTCAAAAGGTAGGGTTGATGC TACAGGATATGGAGTAGCGCTAATCGCGCGCGAAGCTGCGAAAAAGTTAGAAATGGATATAAAGAACTGTACTGTAGCCA TACAGGGTTACGGAAATGTAGGAAGTTACACGGGAATTCACCTGCAGAGACTGGGTGCAAAGATCGTAGGGGTAGTAGAT ATATATGGAGGGGTATATAACGAAAGGGGAATTGACGCAGAGAAGTTAGCAGAACATGTGAGAAAGACAGGGAGTGTCAA AGACTTTGAGGGCACTACTTCTTTAACAAATGAGGAACTATTTGCATTGGACGTAGATGTACTAATTCCCGCAGCTCTTG AGAATCAAATTACGGAAGAAAATGCTCCGAATGTGAAAGCGAGGATGGTATGTGAAGCGGCAAATGGTCCTACAACACCT GAGGCAGACAGGATACTGAGAGAAAAAGGAATTTTTGTAGTACCGGATATACTTGCTAATTCTGGTGGGGTGATTGTTTC TTACTTCGAGTGGGTGCAGAATTTGATGAATTATTATTGGACTGAAGAAGAAATAAAAGAAAGGCAAGAGATTGTGATGA TAAATGCATTTAATAATATATACCAATTGGCTCAAGAATATAAGGTTGATATGAGAACAGCTGCTTATATGATTGCTATA AAGAGAATATATGAAGCGATGAAAGTAAGAGGATGGATATAG
Upstream 100 bases:
>100_bases ATGGCTTCCCTGACGATTAAATTTTTATAGGGGTAAGGGGAAGAAATGTAACATTTTCCCTTACCCCGAAAAATAAAAAA TTATGAGGAGGAATGTAAGA
Downstream 100 bases:
>100_bases AGGAGGTAGAAAAATGAATCTCTCGCAGAATGCTCTTCAAATAACCCCTTCTATGACTTTAGAAATAACGGCAAAGGCGA GACAGTTAAAGGCAGAGGGA
Product: glutamate dehydrogenase/leucine dehydrogenase
Products: NA
Alternate protein names: NAD-GDH [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MAVNPLKAVQEQIKNACELLNLEESVYEILKEPLRVMEVSIPVQMDDGTVKVFKGYRSQHNDALGPAKGGIRFHPDVTLD EVKALSMWMTFKCGVVGLPYGGGKGGVAVNPQELSPTELERLSRGYIRAISSIIGPEKDIPAPDVGTNAQVMAWMVDEYN KIVGYNSPAVITGKPLIYGGSKGRVDATGYGVALIAREAAKKLEMDIKNCTVAIQGYGNVGSYTGIHLQRLGAKIVGVVD IYGGVYNERGIDAEKLAEHVRKTGSVKDFEGTTSLTNEELFALDVDVLIPAALENQITEENAPNVKARMVCEAANGPTTP EADRILREKGIFVVPDILANSGGVIVSYFEWVQNLMNYYWTEEEIKERQEIVMINAFNNIYQLAQEYKVDMRTAAYMIAI KRIYEAMKVRGWI
Sequences:
>Translated_413_residues MAVNPLKAVQEQIKNACELLNLEESVYEILKEPLRVMEVSIPVQMDDGTVKVFKGYRSQHNDALGPAKGGIRFHPDVTLD EVKALSMWMTFKCGVVGLPYGGGKGGVAVNPQELSPTELERLSRGYIRAISSIIGPEKDIPAPDVGTNAQVMAWMVDEYN KIVGYNSPAVITGKPLIYGGSKGRVDATGYGVALIAREAAKKLEMDIKNCTVAIQGYGNVGSYTGIHLQRLGAKIVGVVD IYGGVYNERGIDAEKLAEHVRKTGSVKDFEGTTSLTNEELFALDVDVLIPAALENQITEENAPNVKARMVCEAANGPTTP EADRILREKGIFVVPDILANSGGVIVSYFEWVQNLMNYYWTEEEIKERQEIVMINAFNNIYQLAQEYKVDMRTAAYMIAI KRIYEAMKVRGWI >Mature_412_residues AVNPLKAVQEQIKNACELLNLEESVYEILKEPLRVMEVSIPVQMDDGTVKVFKGYRSQHNDALGPAKGGIRFHPDVTLDE VKALSMWMTFKCGVVGLPYGGGKGGVAVNPQELSPTELERLSRGYIRAISSIIGPEKDIPAPDVGTNAQVMAWMVDEYNK IVGYNSPAVITGKPLIYGGSKGRVDATGYGVALIAREAAKKLEMDIKNCTVAIQGYGNVGSYTGIHLQRLGAKIVGVVDI YGGVYNERGIDAEKLAEHVRKTGSVKDFEGTTSLTNEELFALDVDVLIPAALENQITEENAPNVKARMVCEAANGPTTPE ADRILREKGIFVVPDILANSGGVIVSYFEWVQNLMNYYWTEEEIKERQEIVMINAFNNIYQLAQEYKVDMRTAAYMIAIK RIYEAMKVRGWI
Specific function: Unknown
COG id: COG0334
COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]
Homologues:
Organism=Homo sapiens, GI31377775, Length=354, Percent_Identity=41.2429378531073, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI4885281, Length=348, Percent_Identity=41.9540229885057, Blast_Score=284, Evalue=1e-76, Organism=Escherichia coli, GI1788059, Length=400, Percent_Identity=31.25, Blast_Score=197, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17544676, Length=456, Percent_Identity=34.6491228070175, Blast_Score=271, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6319256, Length=398, Percent_Identity=31.9095477386935, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6324951, Length=414, Percent_Identity=30.9178743961353, Blast_Score=169, Evalue=6e-43, Organism=Drosophila melanogaster, GI45549226, Length=356, Percent_Identity=40.7303370786517, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI45553475, Length=356, Percent_Identity=40.7303370786517, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI24649283, Length=357, Percent_Identity=39.4957983193277, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24649460, Length=295, Percent_Identity=40, Blast_Score=226, Evalue=3e-59,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 9362 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006095 - InterPro: IPR006096 - InterPro: IPR006097 - InterPro: IPR014362 - InterPro: IPR016040 [H]
Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]
EC number: =1.4.1.2 [H]
Molecular weight: Translated: 45504; Mature: 45373
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00074 GLFV_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNPLKAVQEQIKNACELLNLEESVYEILKEPLRVMEVSIPVQMDDGTVKVFKGYRSQH CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEHHHHHHCC NDALGPAKGGIRFHPDVTLDEVKALSMWMTFKCGVVGLPYGGGKGGVAVNPQELSPTELE CCCCCCCCCCEEECCCCCHHHHHHHHHHHEEECCEEECCCCCCCCCEEECCCCCCHHHHH RLSRGYIRAISSIIGPEKDIPAPDVGTNAQVMAWMVDEYNKIVGYNSPAVITGKPLIYGG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEECCEEEECC SKGRVDATGYGVALIAREAAKKLEMDIKNCTVAIQGYGNVGSYTGIHLQRLGAKIVGVVD CCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHCHHHEEHHH IYGGVYNERGIDAEKLAEHVRKTGSVKDFEGTTSLTNEELFALDVDVLIPAALENQITEE HHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC NAPNVKARMVCEAANGPTTPEADRILREKGIFVVPDILANSGGVIVSYFEWVQNLMNYYW CCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEECHHHCCCCCEEEHHHHHHHHHHHHCC TEEEIKERQEIVMINAFNNIYQLAQEYKVDMRTAAYMIAIKRIYEAMKVRGWI CHHHHHCHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AVNPLKAVQEQIKNACELLNLEESVYEILKEPLRVMEVSIPVQMDDGTVKVFKGYRSQH CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEEEECCCEEEEHHHHHHCC NDALGPAKGGIRFHPDVTLDEVKALSMWMTFKCGVVGLPYGGGKGGVAVNPQELSPTELE CCCCCCCCCCEEECCCCCHHHHHHHHHHHEEECCEEECCCCCCCCCEEECCCCCCHHHHH RLSRGYIRAISSIIGPEKDIPAPDVGTNAQVMAWMVDEYNKIVGYNSPAVITGKPLIYGG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCEEEECCEEEECC SKGRVDATGYGVALIAREAAKKLEMDIKNCTVAIQGYGNVGSYTGIHLQRLGAKIVGVVD CCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHCHHHEEHHH IYGGVYNERGIDAEKLAEHVRKTGSVKDFEGTTSLTNEELFALDVDVLIPAALENQITEE HHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCC NAPNVKARMVCEAANGPTTPEADRILREKGIFVVPDILANSGGVIVSYFEWVQNLMNYYW CCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEECHHHCCCCCEEEHHHHHHHHHHHHCC TEEEIKERQEIVMINAFNNIYQLAQEYKVDMRTAAYMIAIKRIYEAMKVRGWI CHHHHHCHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA