Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 20807101

GI number: 20807101

Start: 609738

End: 610025

Strand: Direct

Name: gatC

Synonym: TTE0606

Alternate gene names: 20807101

Gene position: 609738-610025 (Clockwise)

Preceding gene: 20807100

Following gene: 20807102

Centisome position: 22.67

GC content: 40.62

Gene sequence:

>288_bases
ATGGCAATAAGCAAAAGCGAAGTAGAATACATTGCTAAGCTTGCCAGGTTAAAATTTACTGAAGAAGAGATAGAGGCGAT
GGCTCAAGAGCTCAGCAAGATACTGGATTATGTCAACAAATTGAACGAGCTTGACACAGAAAATGTAGAACCTACGGCTC
ACATAGTTCCAATACACAATGTCTTCAGAGAAGACGAGGTCAAACCTTCTATGCCAAGAGAAAAAGTGTTGATGAACGCT
CCTTTTACAGAGCAAGGCTGCTTTAAAGTGCCAAAGATCATAGAGTGA

Upstream 100 bases:

>100_bases
AACGAAGAGCAGTTTGAAGCCATGCTAAAAGGCGATATCCAACCGTAGATTTTTGTGGTAAACTATAAGGGTGAAGAAAT
AAAGAGAAAGGTGTGGTAAA

Downstream 100 bases:

>100_bases
GGAGGTACGCAAATTGGAATTGTATAGTCTGACAGTACATGAACTTAAAGAACTTCTCCATAAAAGAGAAGTAAGTGCAC
AAGAGGTGACAAAATCCTAC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MAISKSEVEYIAKLARLKFTEEEIEAMAQELSKILDYVNKLNELDTENVEPTAHIVPIHNVFREDEVKPSMPREKVLMNA
PFTEQGCFKVPKIIE

Sequences:

>Translated_95_residues
MAISKSEVEYIAKLARLKFTEEEIEAMAQELSKILDYVNKLNELDTENVEPTAHIVPIHNVFREDEVKPSMPREKVLMNA
PFTEQGCFKVPKIIE
>Mature_94_residues
AISKSEVEYIAKLARLKFTEEEIEAMAQELSKILDYVNKLNELDTENVEPTAHIVPIHNVFREDEVKPSMPREKVLMNAP
FTEQGCFKVPKIIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_THETN (Q8RC41)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_622272.1
- ProteinModelPortal:   Q8RC41
- SMR:   Q8RC41
- GeneID:   996405
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0606
- NMPDR:   fig|273068.3.peg.152
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- BioCyc:   TTEN273068:TTE0606-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10947; Mature: 10816

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISKSEVEYIAKLARLKFTEEEIEAMAQELSKILDYVNKLNELDTENVEPTAHIVPIHN
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH
VFREDEVKPSMPREKVLMNAPFTEQGCFKVPKIIE
HHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AISKSEVEYIAKLARLKFTEEEIEAMAQELSKILDYVNKLNELDTENVEPTAHIVPIHN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHH
VFREDEVKPSMPREKVLMNAPFTEQGCFKVPKIIE
HHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336