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The map label for this gene is recR

Identifier: 20806579

GI number: 20806579

Start: 50628

End: 51227

Strand: Direct

Name: recR

Synonym: TTE0041

Alternate gene names: 20806579

Gene position: 50628-51227 (Clockwise)

Preceding gene: 20806578

Following gene: 20806580

Centisome position: 1.88

GC content: 39.0

Gene sequence:

>600_bases
ATGAGTTACTATTCTACTTCTGTGGCAAAGCTTATAGAGGAACTTTCTAAATTGCCTGGGATAGGACCCAAAACGGCCCA
GAGATTAGCATTTTTCATAATAAATATGCCTTTAGACGAAGTAAGAAGTCTTTCTCAGGCTATTATAGAAGCGAAAGAGA
AATTGAGATATTGCAAAATTTGTTTTAACATAACTGATAAAGAAGTGTGTGACATATGCAGTGATGAAAATAGAGACCAT
TCCACCATATGTGTTGTGTCCCATCCGATGGATGTAGTTGCGATGGAAAAAGTCAAGGAATACAAAGGAGTGTACCATGT
TCTGCATGGTGTTATTTCACCTATAGAGGGAGTAGGACCGGAAGATATAAGGATAAAAGAACTTTTGGAAAGAGTAAGGG
ATGGCAGTGTAAAAGAAGTCATACTTGCCACAAATCCAGATATAGAAGGAGAAGCTACAGCGATGTATATAGCTAAACTG
CTGAAACCCTTTGGAGTAAAGGTTACAAGGATTGCTCATGGCATTCCTGTGGGAGGAGATTTGGAGTATACAGATGTTGT
GACTTTGTCAAAAGCTCTAGAGGGAAGAAGAGAGGTGTGA

Upstream 100 bases:

>100_bases
TGTGAACCAGGCTTTGAGAAATGCAGAAGAAATGATTGCTTCTGAAATGGCTAAAATAACAGGAGGATTTAATATTCCAG
GTTTGTTTTGAGGTGGAAAG

Downstream 100 bases:

>100_bases
TGGGGAAGCTCCTATTAGGCAGAGCCTAGTAGGGGCACTTTTATTAATTTTTAGAATAATGTCGAAAATTGTATATACAG
CTTTAAAAAAGTAGTGTATA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDKEVCDICSDENRDH
STICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKL
LKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV

Sequences:

>Translated_199_residues
MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDKEVCDICSDENRDH
STICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKL
LKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV
>Mature_198_residues
SYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKICFNITDKEVCDICSDENRDHS
TICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLL
KPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=45.0777202072539, Blast_Score=184, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_THETN (Q8RDI4)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_621750.1
- ProteinModelPortal:   Q8RDI4
- SMR:   Q8RDI4
- GeneID:   996575
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0041
- NMPDR:   fig|273068.3.peg.24
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   TTEN273068:TTE0041-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR011257
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- Gene3D:   G3DSA:1.10.340.30
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF00633 HHH; PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22117; Mature: 21986

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKI
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGP
HHCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGD
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
LEYTDVVTLSKALEGRREV
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYCKI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGP
HHCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGD
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
LEYTDVVTLSKALEGRREV
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336