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The map label for this gene is ybaB [C]

Identifier: 20806578

GI number: 20806578

Start: 50283

End: 50618

Strand: Direct

Name: ybaB [C]

Synonym: TTE0040

Alternate gene names: 20806578

Gene position: 50283-50618 (Clockwise)

Preceding gene: 20806577

Following gene: 20806579

Centisome position: 1.87

GC content: 38.69

Gene sequence:

>336_bases
ATGGCAAAAGGTGGATTTCCAGGAGGATTTAATATTAACAATATGATCAAACAAGCACAACAGATGCAAGAAGAAATAAA
AAAGATGCAGGAAGAGTTAATGCAGAAGACAGTGGAGGGTACTTCAGGGGGAGGAATGGTAAAAGCAGTAGCAAACGGGA
GGAAAGAACTTGTAAGCATAAATATAAACCCTGAAGTGGTAGATAAAGACGATGTAGAGACTTTAGAGGACCTGGTGTTA
GCAGCTGTGAACCAGGCTTTGAGAAATGCAGAAGAAATGATTGCTTCTGAAATGGCTAAAATAACAGGAGGATTTAATAT
TCCAGGTTTGTTTTGA

Upstream 100 bases:

>100_bases
GGAATTTTTTGGGGATGGAATTGACATAGAAATAATATAGTGCAAAAGAGGCAAAAAGCACATATTCTAAAATAGAGTAA
AAGAATTGGGAGGTAATGAA

Downstream 100 bases:

>100_bases
GGTGGAAAGATGAGTTACTATTCTACTTCTGTGGCAAAGCTTATAGAGGAACTTTCTAAATTGCCTGGGATAGGACCCAA
AACGGCCCAGAGATTAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAKGGFPGGFNINNMIKQAQQMQEEIKKMQEELMQKTVEGTSGGGMVKAVANGRKELVSININPEVVDKDDVETLEDLVL
AAVNQALRNAEEMIASEMAKITGGFNIPGLF

Sequences:

>Translated_111_residues
MAKGGFPGGFNINNMIKQAQQMQEEIKKMQEELMQKTVEGTSGGGMVKAVANGRKELVSININPEVVDKDDVETLEDLVL
AAVNQALRNAEEMIASEMAKITGGFNIPGLF
>Mature_110_residues
AKGGFPGGFNINNMIKQAQQMQEEIKKMQEELMQKTVEGTSGGGMVKAVANGRKELVSININPEVVDKDDVETLEDLVLA
AVNQALRNAEEMIASEMAKITGGFNIPGLF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=100, Percent_Identity=46, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 11998; Mature: 11867

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGGFPGGFNINNMIKQAQQMQEEIKKMQEELMQKTVEGTSGGGMVKAVANGRKELVSI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHEEEE
NINPEVVDKDDVETLEDLVLAAVNQALRNAEEMIASEMAKITGGFNIPGLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKGGFPGGFNINNMIKQAQQMQEEIKKMQEELMQKTVEGTSGGGMVKAVANGRKELVSI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHEEEE
NINPEVVDKDDVETLEDLVLAAVNQALRNAEEMIASEMAKITGGFNIPGLF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA