Click here to switch to the map view.

The map label for this gene is yhbY [C]

Identifier: 20095057

GI number: 20095057

Start: 1624522

End: 1624839

Strand: Reverse

Name: yhbY [C]

Synonym: MK1621

Alternate gene names: 20095057

Gene position: 1624839-1624522 (Counterclockwise)

Preceding gene: 20095058

Following gene: 20095056

Centisome position: 95.86

GC content: 60.06

Gene sequence:

>318_bases
GTGACGCAGGTTAAACGCCTGAGCGGTAAGGAGCGTAGGGCACTCCGAGCCCGCGCGGTCCTGCTGGATCCCGTTGTGAG
GATAGGGAAGAAAGGACTGACTTCCGGAGTCATCCAGGAAGTCGATCGACAGCTGGAGGAGCGCGGACTCATTAAGGTCA
GGTTCGAGCGAAACATCCTACGTCGGTACGACCGGAAGGAGCTGGCCGAAGAACTCGCCAGGAAGGTCAACGCGGAGCTG
ATCGACGTACGCGGACGTACGGCAGTACTCTTCCGACCGAGAGAAGGATGGCGGAGGTTCCACGGGCTCTCCCGTTAA

Upstream 100 bases:

>100_bases
GTGTCGGTCACCTGCCTCGAGTGTGGCTATATATATCGGTATCCGTACTTACGGGAGGTAAAGGAGCGGAGACGCAGGCA
TATGGAGGGGGTGAAGGATC

Downstream 100 bases:

>100_bases
ACCCATTAACGCGCCCTCTGCGGCCGGCGGAGGGGGGTTAGGTCCGTGTACGATGCCTACGTGGTGCCCGGATCGGAGCT
CGTGGAGCGTCTGGCGGAGA

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTQVKRLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNILRRYDRKELAEELARKVNAEL
IDVRGRTAVLFRPREGWRRFHGLSR

Sequences:

>Translated_105_residues
MTQVKRLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNILRRYDRKELAEELARKVNAEL
IDVRGRTAVLFRPREGWRRFHGLSR
>Mature_104_residues
TQVKRLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNILRRYDRKELAEELARKVNAELI
DVRGRTAVLFRPREGWRRFHGLSR

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 12360; Mature: 12229

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVKRLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNIL
CCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHH
RRYDRKELAEELARKVNAELIDVRGRTAVLFRPREGWRRFHGLSR
HHCCHHHHHHHHHHHHCCHHEECCCCEEEEECCHHHHHHHCCCCC
>Mature Secondary Structure 
TQVKRLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNIL
CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHH
RRYDRKELAEELARKVNAELIDVRGRTAVLFRPREGWRRFHGLSR
HHCCHHHHHHHHHHHHCCHHEECCCCEEEEECCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]