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The map label for this gene is RPS19A [H]

Identifier: 20095056

GI number: 20095056

Start: 1624027

End: 1624476

Strand: Reverse

Name: RPS19A [H]

Synonym: MK1620

Alternate gene names: 20095056

Gene position: 1624476-1624027 (Counterclockwise)

Preceding gene: 20095057

Following gene: 20095055

Centisome position: 95.84

GC content: 62.44

Gene sequence:

>450_bases
GTGTACGATGCCTACGTGGTGCCCGGATCGGAGCTCGTGGAGCGTCTGGCGGAGAAGCTCAAGGACTTCGAGGAGATCAA
ACCGCCCGAGTGGGCGAAGTACGTCAAGACAGGCCGCCACAAGGAGCGTCCGCCGGAGGATCCGGACTGGTGGTACATGC
GAGCGGCATCGATCCTGCGCCGAGTGTACATGGACGGCCCGGTGGGAGTCTCCCGACTGCGCACGTACTACGGAGGTCGT
CAGGACCGGGGAGCCCGGCCCGAGCGGTTCCGGAAGGGAAGTGGTGCGATCATCCGCAAGATCCTGCAGCAGTTGGAGGA
GGCCGGACTGGTCGAGAAGACCGAAGAAGGCCGAGTGGTCACACCTGAAGGCAGGTCCCTCGTCGACTCAACCGCCCATG
AGATCGCCAAGGAGAAGGGATACACGGATAAATTCACGTCTCCCATCTAA

Upstream 100 bases:

>100_bases
AGTACTCTTCCGACCGAGAGAAGGATGGCGGAGGTTCCACGGGCTCTCCCGTTAAACCCATTAACGCGCCCTCTGCGGCC
GGCGGAGGGGGGTTAGGTCC

Downstream 100 bases:

>100_bases
CCGCCGATCGGGGGTAGGAGGTCGCCACTATGACCGACCCCGAGCTCGAGCGCATCCGGCGTAAGAAGATTATGGAACTC
CAACGCAAGCTGGAGGAGTC

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MYDAYVVPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGR
QDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEEGRVVTPEGRSLVDSTAHEIAKEKGYTDKFTSPI

Sequences:

>Translated_149_residues
MYDAYVVPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGR
QDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEEGRVVTPEGRSLVDSTAHEIAKEKGYTDKFTSPI
>Mature_149_residues
MYDAYVVPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGR
QDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEEGRVVTPEGRSLVDSTAHEIAKEKGYTDKFTSPI

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=131, Percent_Identity=41.9847328244275, Blast_Score=105, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17508697, Length=131, Percent_Identity=38.9312977099237, Blast_Score=96, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6324027, Length=134, Percent_Identity=36.5671641791045, Blast_Score=87, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324451, Length=134, Percent_Identity=36.5671641791045, Blast_Score=86, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24649452, Length=129, Percent_Identity=41.0852713178295, Blast_Score=102, Evalue=8e-23,
Organism=Drosophila melanogaster, GI17647891, Length=139, Percent_Identity=38.8489208633094, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24642576, Length=139, Percent_Identity=38.8489208633094, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24642574, Length=139, Percent_Identity=38.8489208633094, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 17171; Mature: 17171

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDAYVVPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILR
CCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
RVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEEGRVV
HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEE
TPEGRSLVDSTAHEIAKEKGYTDKFTSPI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYDAYVVPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILR
CCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
RVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEEGRVV
HHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEE
TPEGRSLVDSTAHEIAKEKGYTDKFTSPI
CCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]