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The map label for this gene is RPL20A

Identifier: 20095051

GI number: 20095051

Start: 1622271

End: 1622513

Strand: Reverse

Name: RPL20A

Synonym: MK1615

Alternate gene names: 20095051

Gene position: 1622513-1622271 (Counterclockwise)

Preceding gene: 20095052

Following gene: 20095050

Centisome position: 95.73

GC content: 58.44

Gene sequence:

>243_bases
ATGTCCGAGGTGAAGGTGTTCGAGGTCCGTGGTACGTTCCGCATGGGTGACGAGCCTCGACAACCGTTCACGCGTCAGGT
TCCGGCCACGTCCGAAGAGGAAGCGCTGGAGAAGGTGTACTCCGATCTCGGTAGCGAGCACGGCGTCAGCCGCATGGAGA
TTCAGATCGAAGAGATCCGGGAGATAGACCCCTCTAAGGTAGAGGATCCGATACTGAGGCGGCTTCTGGGTGTGGAAGAG
TAA

Upstream 100 bases:

>100_bases
TGAACTCTAAAGGTGCTGTTGTCGGTGAGGATACGACGGGTCCCGAGCTCGCCCGTTTGGAGGATGCCCTGTACCTCATC
TGAATCCGGGGGTATTCCCG

Downstream 100 bases:

>100_bases
TGGCGGAGAAGAAGAACGAGCAAGAGATCCAACAGGAACTACAGCGACTGATAGCCGAGATCAACAGACTTCAAGGGCAA
ATGGAGGCGATCAACGCGCA

Product: ribosomal protein L20A (L18A)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSEVKVFEVRGTFRMGDEPRQPFTRQVPATSEEEALEKVYSDLGSEHGVSRMEIQIEEIREIDPSKVEDPILRRLLGVEE

Sequences:

>Translated_80_residues
MSEVKVFEVRGTFRMGDEPRQPFTRQVPATSEEEALEKVYSDLGSEHGVSRMEIQIEEIREIDPSKVEDPILRRLLGVEE
>Mature_79_residues
SEVKVFEVRGTFRMGDEPRQPFTRQVPATSEEEALEKVYSDLGSEHGVSRMEIQIEEIREIDPSKVEDPILRRLLGVEE

Specific function: Unknown

COG id: COG2157

COG function: function code J; Ribosomal protein L20A (L18A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein LX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RLX_METKA (Q8TUY6)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614898.1
- ProteinModelPortal:   Q8TUY6
- SMR:   Q8TUY6
- GeneID:   1478210
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1615
- NMPDR:   fig|190192.1.peg.1611
- HOGENOM:   HBG733155
- OMA:   QVPATSE
- BioCyc:   MKAN190192:MK1615-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00273
- InterPro:   IPR021138
- InterPro:   IPR002768
- ProDom:   PD010302

Pfam domain/function: PF01775 Ribosomal_L18ae

EC number: NA

Molecular weight: Translated: 9233; Mature: 9101

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVKVFEVRGTFRMGDEPRQPFTRQVPATSEEEALEKVYSDLGSEHGVSRMEIQIEEIR
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEHHHHH
EIDPSKVEDPILRRLLGVEE
CCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SEVKVFEVRGTFRMGDEPRQPFTRQVPATSEEEALEKVYSDLGSEHGVSRMEIQIEEIR
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEHHHHH
EIDPSKVEDPILRRLLGVEE
CCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014