Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095022

Identifier: 20095022

GI number: 20095022

Start: 1597665

End: 1598027

Strand: Reverse

Name: 20095022

Synonym: MK1586

Alternate gene names: NA

Gene position: 1598027-1597665 (Counterclockwise)

Preceding gene: 20095028

Following gene: 20095019

Centisome position: 94.28

GC content: 58.13

Gene sequence:

>363_bases
ATGAGGAACGGTCCCCCGAAACCCCCGTTCCGAAAGATTTTTTTCAAGGTGTCGGAGGCCCGGCAACAGTCCTCATCGGA
GGGGGGTGGCGACTTGTCGGACTACGAAGAGAAGTTCGAACAGTGTTGCACCCTGTTGGAGCAGCGGATTATTCAAGACG
ACCAGATCCCGAGGAACGTGCGCCGTGCGGCCAAGCAAGCGATCGAGGCGTTGAAAGAAGAGGGACAGTCCCCCGGCGTC
CGGGCCAGCACGGCCATCTCCACCCTGGAGGAAGTGGTGAACGACCAAAACACCCCCGAATACGCCCGCACCGTGCTCTT
GCAAGTGATAGCAACCCTCGAACAAGTTAAGGATGAGGTCTAA

Upstream 100 bases:

>100_bases
CATCCCTTCCGATCTCATGACCGAAACTGTAGCCTGTCGTTCTGTCAAGCCGTATACGTCCATCAGTACCTCGATTACGT
CTCGGTTTATTCCGGAACGC

Downstream 100 bases:

>100_bases
GTACGGCCAGCCTGGCCGCCTCCTCTAAGGCTTCCGCGAGTCTCAAGGCCGCTTCGGGTCTATCCGCGACGACGAGACCG
CCATGACGCTCCAGTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNVRRAAKQAIEALKEEGQSPGV
RASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV

Sequences:

>Translated_120_residues
MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNVRRAAKQAIEALKEEGQSPGV
RASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV
>Mature_120_residues
MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNVRRAAKQAIEALKEEGQSPGV
RASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV

Specific function: Unknown

COG id: COG1698

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0147 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023130
- InterPro:   IPR005354
- ProDom:   PD029943 [H]

Pfam domain/function: PF03685 UPF0147 [H]

EC number: NA

Molecular weight: Translated: 13492; Mature: 13492

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RRAAKQAIEALKEEGQSPGVRASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNV
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RRAAKQAIEALKEEGQSPGVRASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]