| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095022
Identifier: 20095022
GI number: 20095022
Start: 1597665
End: 1598027
Strand: Reverse
Name: 20095022
Synonym: MK1586
Alternate gene names: NA
Gene position: 1598027-1597665 (Counterclockwise)
Preceding gene: 20095028
Following gene: 20095019
Centisome position: 94.28
GC content: 58.13
Gene sequence:
>363_bases ATGAGGAACGGTCCCCCGAAACCCCCGTTCCGAAAGATTTTTTTCAAGGTGTCGGAGGCCCGGCAACAGTCCTCATCGGA GGGGGGTGGCGACTTGTCGGACTACGAAGAGAAGTTCGAACAGTGTTGCACCCTGTTGGAGCAGCGGATTATTCAAGACG ACCAGATCCCGAGGAACGTGCGCCGTGCGGCCAAGCAAGCGATCGAGGCGTTGAAAGAAGAGGGACAGTCCCCCGGCGTC CGGGCCAGCACGGCCATCTCCACCCTGGAGGAAGTGGTGAACGACCAAAACACCCCCGAATACGCCCGCACCGTGCTCTT GCAAGTGATAGCAACCCTCGAACAAGTTAAGGATGAGGTCTAA
Upstream 100 bases:
>100_bases CATCCCTTCCGATCTCATGACCGAAACTGTAGCCTGTCGTTCTGTCAAGCCGTATACGTCCATCAGTACCTCGATTACGT CTCGGTTTATTCCGGAACGC
Downstream 100 bases:
>100_bases GTACGGCCAGCCTGGCCGCCTCCTCTAAGGCTTCCGCGAGTCTCAAGGCCGCTTCGGGTCTATCCGCGACGACGAGACCG CCATGACGCTCCAGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNVRRAAKQAIEALKEEGQSPGV RASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV
Sequences:
>Translated_120_residues MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNVRRAAKQAIEALKEEGQSPGV RASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV >Mature_120_residues MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNVRRAAKQAIEALKEEGQSPGV RASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV
Specific function: Unknown
COG id: COG1698
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0147 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023130 - InterPro: IPR005354 - ProDom: PD029943 [H]
Pfam domain/function: PF03685 UPF0147 [H]
EC number: NA
Molecular weight: Translated: 13492; Mature: 13492
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RRAAKQAIEALKEEGQSPGVRASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRNGPPKPPFRKIFFKVSEARQQSSSEGGGDLSDYEEKFEQCCTLLEQRIIQDDQIPRNV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RRAAKQAIEALKEEGQSPGVRASTAISTLEEVVNDQNTPEYARTVLLQVIATLEQVKDEV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]