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The map label for this gene is RecJ_1 [H]

Identifier: 20095028

GI number: 20095028

Start: 1601691

End: 1603019

Strand: Reverse

Name: RecJ_1 [H]

Synonym: MK1592

Alternate gene names: 20095028

Gene position: 1603019-1601691 (Counterclockwise)

Preceding gene: 20095029

Following gene: 20095022

Centisome position: 94.58

GC content: 60.05

Gene sequence:

>1329_bases
CTGGGGGTGAAGCGGGGCGGTACCTTGAGCGATGACGGGTTCGAAGGTACTCTGGAAGAAGCTGTCGAGTTCCTGGAAGA
TCTGGAGGGAACTGCCGTCCGCCTCTACGTTCACAACGACGCGGACGGGCTCACGGCAGGGGCACTGATGGCCTTCACGC
TCCGGTGCCTCGAGGTACCCACACGGCTTCGGGTACTGAACACGGAAACGGAGCTGTTAAAGGAGGATCTTGACGGCCCT
ACCGTGGTCGTGGATATGGGGAGCGGGATCCTGGACAAGCTACGGAACGACCACCCCGTGCTCGTCATCGACCACCACGA
GATTTCGTCGAAACCTTCGGACAACGTACTTCTGGTGAACCCACGAGAGCACGGTGTCGACGGTGGTACGGAAGCTTCGG
CTTCCACAGTAGCGTACTTGCTGTGCCGACGCGTGGTTAAAGTCGAAGAGACGTGTCTGCCGAAAGCCGCGCTGGTCGGC
GCCTACGGTGACAATCAAGCCGGTAAGAGAGGAGTTCGAGGCTTGAACAGGGTGCCGGAGGAGGACGGGGAGAAGCACGA
AATCATCGAGATCCGAGACCCAGCCTACTGGGTGTTCGGACGCGCGTCGATGACCGTAGGGGAGATCGTGGAGCGCGTTT
CCGGCGCTTCGGTGCGGGAGGCGTTAGAGGCCAGATTCGGCGATCTAGACGTGGCCCCCGTGGATTTGAGTCGAGAAGAT
GAAGCCGAAATAGTTCGAGAACATCGAGAACTTTTGAGCGGTGAGAAGAGGAAGGAGCTCGAGTCCAAGACGGGTCGCAT
CCACGTGTTCGACGAGGAGCGTCCTCTCAAGGCCCTTCGAGATCCCTTAGAGACGGCTACGCTCCTCAACGCCTGCGGCA
GATACGGGGAGGGGTGGGCGGGTGTCCTGATCGCCATGGGGTCTTGGGATCCCCTCCAGCTGGCCAAGAAGCTCAGGAGC
AAGCACAAGGCCATCATCCGGGAAGCATTGAGTAGGCTGAGTCGCGGAGAAGGTATCACGGACCGAGAGAGCATGGTAGT
GATCGACGGTCGCGAGCTCGGGATCCCGCACACCGTAGTGGGAATCGTAGCCCAGTTCGTGTGTGAGGAGCGGGAGCGTG
TGACCGTAGGTGTGGCTGAAATGGAAGAGGGTCTCGTGAAGGTGTCGATACGTTGTCCGGAGAACTCGGATGTGGATGCC
GCCGAAGTGATCAAAGAGGCGGCTGATCGCGTGGATGGAGAAGGAGGGGGACACGAGAGGGCTGCGGGTGCCGAAGTCCC
CGAAGATCGGCTGGAGGAGTTCCTTCTAGAGCTCGAGAAGCTCCTATGA

Upstream 100 bases:

>100_bases
CCCGGAGGCCCTCCACGTGGAATGAGCTCTCGCCTCGCCCAATTGTTACGATTCTATTAACGTTCGATCGCCCGATGGCT
ACAACTCGGTAGATGCCCAG

Downstream 100 bases:

>100_bases
TTCGTACAGCCACTCCTCGTCGCATCGTTCGTAATCTATCGTGGATAGGTCCTTGCCGAACACTATCTCGATCTCCCGCT
CGGCGGACTCCGGAGAGTCG

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MGVKRGGTLSDDGFEGTLEEAVEFLEDLEGTAVRLYVHNDADGLTAGALMAFTLRCLEVPTRLRVLNTETELLKEDLDGP
TVVVDMGSGILDKLRNDHPVLVIDHHEISSKPSDNVLLVNPREHGVDGGTEASASTVAYLLCRRVVKVEETCLPKAALVG
AYGDNQAGKRGVRGLNRVPEEDGEKHEIIEIRDPAYWVFGRASMTVGEIVERVSGASVREALEARFGDLDVAPVDLSRED
EAEIVREHRELLSGEKRKELESKTGRIHVFDEERPLKALRDPLETATLLNACGRYGEGWAGVLIAMGSWDPLQLAKKLRS
KHKAIIREALSRLSRGEGITDRESMVVIDGRELGIPHTVVGIVAQFVCEERERVTVGVAEMEEGLVKVSIRCPENSDVDA
AEVIKEAADRVDGEGGGHERAAGAEVPEDRLEEFLLELEKLL

Sequences:

>Translated_442_residues
MGVKRGGTLSDDGFEGTLEEAVEFLEDLEGTAVRLYVHNDADGLTAGALMAFTLRCLEVPTRLRVLNTETELLKEDLDGP
TVVVDMGSGILDKLRNDHPVLVIDHHEISSKPSDNVLLVNPREHGVDGGTEASASTVAYLLCRRVVKVEETCLPKAALVG
AYGDNQAGKRGVRGLNRVPEEDGEKHEIIEIRDPAYWVFGRASMTVGEIVERVSGASVREALEARFGDLDVAPVDLSRED
EAEIVREHRELLSGEKRKELESKTGRIHVFDEERPLKALRDPLETATLLNACGRYGEGWAGVLIAMGSWDPLQLAKKLRS
KHKAIIREALSRLSRGEGITDRESMVVIDGRELGIPHTVVGIVAQFVCEERERVTVGVAEMEEGLVKVSIRCPENSDVDA
AEVIKEAADRVDGEGGGHERAAGAEVPEDRLEEFLLELEKLL
>Mature_441_residues
GVKRGGTLSDDGFEGTLEEAVEFLEDLEGTAVRLYVHNDADGLTAGALMAFTLRCLEVPTRLRVLNTETELLKEDLDGPT
VVVDMGSGILDKLRNDHPVLVIDHHEISSKPSDNVLLVNPREHGVDGGTEASASTVAYLLCRRVVKVEETCLPKAALVGA
YGDNQAGKRGVRGLNRVPEEDGEKHEIIEIRDPAYWVFGRASMTVGEIVERVSGASVREALEARFGDLDVAPVDLSREDE
AEIVREHRELLSGEKRKELESKTGRIHVFDEERPLKALRDPLETATLLNACGRYGEGWAGVLIAMGSWDPLQLAKKLRSK
HKAIIREALSRLSRGEGITDRESMVVIDGRELGIPHTVVGIVAQFVCEERERVTVGVAEMEEGLVKVSIRCPENSDVDAA
EVIKEAADRVDGEGGGHERAAGAEVPEDRLEEFLLELEKLL

Specific function: Single-stranded-DNA-specific exonuclease [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 48398; Mature: 48267

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKRGGTLSDDGFEGTLEEAVEFLEDLEGTAVRLYVHNDADGLTAGALMAFTLRCLEVP
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
TRLRVLNTETELLKEDLDGPTVVVDMGSGILDKLRNDHPVLVIDHHEISSKPSDNVLLVN
HHHEEECCHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC
PREHGVDGGTEASASTVAYLLCRRVVKVEETCLPKAALVGAYGDNQAGKRGVRGLNRVPE
CHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHCCCC
EDGEKHEIIEIRDPAYWVFGRASMTVGEIVERVSGASVREALEARFGDLDVAPVDLSRED
CCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCH
EAEIVREHRELLSGEKRKELESKTGRIHVFDEERPLKALRDPLETATLLNACGRYGEGWA
HHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
GVLIAMGSWDPLQLAKKLRSKHKAIIREALSRLSRGEGITDRESMVVIDGRELGIPHTVV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHH
GIVAQFVCEERERVTVGVAEMEEGLVKVSIRCPENSDVDAAEVIKEAADRVDGEGGGHER
HHHHHHHHCCHHHEEEEHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
AAGAEVPEDRLEEFLLELEKLL
CCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GVKRGGTLSDDGFEGTLEEAVEFLEDLEGTAVRLYVHNDADGLTAGALMAFTLRCLEVP
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCC
TRLRVLNTETELLKEDLDGPTVVVDMGSGILDKLRNDHPVLVIDHHEISSKPSDNVLLVN
HHHEEECCHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC
PREHGVDGGTEASASTVAYLLCRRVVKVEETCLPKAALVGAYGDNQAGKRGVRGLNRVPE
CHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHCCCC
EDGEKHEIIEIRDPAYWVFGRASMTVGEIVERVSGASVREALEARFGDLDVAPVDLSRED
CCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCH
EAEIVREHRELLSGEKRKELESKTGRIHVFDEERPLKALRDPLETATLLNACGRYGEGWA
HHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
GVLIAMGSWDPLQLAKKLRSKHKAIIREALSRLSRGEGITDRESMVVIDGRELGIPHTVV
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHH
GIVAQFVCEERERVTVGVAEMEEGLVKVSIRCPENSDVDAAEVIKEAADRVDGEGGGHER
HHHHHHHHCCHHHEEEEHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
AAGAEVPEDRLEEFLLELEKLL
CCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 10633092 [H]