| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094964
Identifier: 20094964
GI number: 20094964
Start: 1539400
End: 1539711
Strand: Direct
Name: 20094964
Synonym: MK1528
Alternate gene names: NA
Gene position: 1539400-1539711 (Clockwise)
Preceding gene: 20094963
Following gene: 20094965
Centisome position: 90.82
GC content: 61.22
Gene sequence:
>312_bases ATGGAACTCCGATGCCCGTACTGCGGCTCGCGCTCCTGTGTGAACGAATCCGCCCTGTCGTTGTTCCTCCGGGCGTCCGA ACGCGCCGCGAGGTACGTGGTCAAGGGGCGAGATGACGTGGACGAAGATCCGAACTTCCGTCCCTCGTTCGGTGAAGTCG GGATCTGTAAGGAGACTTCCAAGCGCATATGGGTGTGTCCATACTGTCACTCCCTCATCCCGGAGCTCGAACCCGATGGG ATGACCGCCCGATGTCCCGAATGCGGGCGGGAAGCTAACGTGGCACCCTCCCGCCGTAAGATCGTGTGTTGA
Upstream 100 bases:
>100_bases GGGCGAACCCCGTCCCCGGGGAGCCCCGTGGGGTGAAGCGGGGGCAAGTCCCCCGCGGCCCGGGCCTTTCACTCCGTAAC TCCCTCCGGGGTGCGTCCAT
Downstream 100 bases:
>100_bases AAGGAGCACAGCTCCGGGTGTCGGATGGGGGGGTTCGTTTGGCCAAAGAACTTCTGATCAAGAACGCCTGCGTGTACGAC CCCCTCAACGGGATCGAAGG
Product: Zn-ribbon-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MELRCPYCGSRSCVNESALSLFLRASERAARYVVKGRDDVDEDPNFRPSFGEVGICKETSKRIWVCPYCHSLIPELEPDG MTARCPECGREANVAPSRRKIVC
Sequences:
>Translated_103_residues MELRCPYCGSRSCVNESALSLFLRASERAARYVVKGRDDVDEDPNFRPSFGEVGICKETSKRIWVCPYCHSLIPELEPDG MTARCPECGREANVAPSRRKIVC >Mature_103_residues MELRCPYCGSRSCVNESALSLFLRASERAARYVVKGRDDVDEDPNFRPSFGEVGICKETSKRIWVCPYCHSLIPELEPDG MTARCPECGREANVAPSRRKIVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020505 - ProDom: PD066852 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11586; Mature: 11586
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 8.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRCPYCGSRSCVNESALSLFLRASERAARYVVKGRDDVDEDPNFRPSFGEVGICKETS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC KRIWVCPYCHSLIPELEPDGMTARCPECGREANVAPSRRKIVC CEEEECCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MELRCPYCGSRSCVNESALSLFLRASERAARYVVKGRDDVDEDPNFRPSFGEVGICKETS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC KRIWVCPYCHSLIPELEPDGMTARCPECGREANVAPSRRKIVC CEEEECCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]