| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094838
Identifier: 20094838
GI number: 20094838
Start: 1426225
End: 1426971
Strand: Reverse
Name: 20094838
Synonym: MK1402
Alternate gene names: NA
Gene position: 1426971-1426225 (Counterclockwise)
Preceding gene: 20094839
Following gene: 20094836
Centisome position: 84.19
GC content: 60.51
Gene sequence:
>747_bases GTGAGGGCTGTCTTCTACCTACTGCCCTTGTACATAAAGTCGGACGACGCGTGGGAACTCGGGAGACTGCTCCGGGCCCT GGACACCAGAAACCGTAGGGTTCTCGTCCTGGATAGGGCCCGTTCCTTCGTCCACAACCTCCATCAGGCCCTTCGAGACG CCGAGCGGATCCGGAGCGTCGAGGATCTGCAGCAGTTCGCGGGGCAGGGTGGAGGGATAGGTGTAGCCGAGATCATCAAG GGACTCGTCGGCGCCGACGTGCACGGGCTTGAGGCCATGGTGGTGTGCCGAACGTACCTGTCCAACTACGCGGCGCAGCG GTCCATCATCGTTCCGATAATGCTACATAAGATCCGACTGGAGCCGAAGGACGTTTTCGACGACAACCCCCTCGACGCCC TGAGGTTGGAAGCCCTGGAGAGCGTCCTTTACGACCTGGCGATCGTGGCGGGCCGGGCGGTGAGATCCGAGGGGGACGAG TACCCGTTCACGGTCCTGTTGGGGGCCGGAACCGTCGTCCGTGTGGCTCAGAACTACCCGGATCACGCGATGGAGATCTA CGAGAACTTCGTGGAGACCTTCAAGGACGAGTTAGACCCCGAAGTACGCGTCTACGACCTGGGTTCGAAGTCTGAGGTAC CGCTGGAAGAGCTCGAGGACGTCGAGGTCAAGAAGTTCGAAGAACTGAGCGAGGATGAGCGGAAGGAGCTGGTTAACTGG ATGAACGGGCAGATAGCGGTACGTTAG
Upstream 100 bases:
>100_bases AGCTGCTCATGGGCCCCGAGTACTTCGAGCTCCCGGTGGCGTACCTCGTGGCCGAGAACCGGCCCACCCTGAGCGAGCTG GACCGCCGGGGTGTGGGAGT
Downstream 100 bases:
>100_bases GAAGGGCGGACTCTACAGGTGCCCGCTCGCGCTCCGACATACTCGCGTCGCTCGTCACGTCCTCGCGCGGCACTCCCACT CCCGTCCGGCGACCACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRAVFYLLPLYIKSDDAWELGRLLRALDTRNRRVLVLDRARSFVHNLHQALRDAERIRSVEDLQQFAGQGGGIGVAEIIK GLVGADVHGLEAMVVCRTYLSNYAAQRSIIVPIMLHKIRLEPKDVFDDNPLDALRLEALESVLYDLAIVAGRAVRSEGDE YPFTVLLGAGTVVRVAQNYPDHAMEIYENFVETFKDELDPEVRVYDLGSKSEVPLEELEDVEVKKFEELSEDERKELVNW MNGQIAVR
Sequences:
>Translated_248_residues MRAVFYLLPLYIKSDDAWELGRLLRALDTRNRRVLVLDRARSFVHNLHQALRDAERIRSVEDLQQFAGQGGGIGVAEIIK GLVGADVHGLEAMVVCRTYLSNYAAQRSIIVPIMLHKIRLEPKDVFDDNPLDALRLEALESVLYDLAIVAGRAVRSEGDE YPFTVLLGAGTVVRVAQNYPDHAMEIYENFVETFKDELDPEVRVYDLGSKSEVPLEELEDVEVKKFEELSEDERKELVNW MNGQIAVR >Mature_248_residues MRAVFYLLPLYIKSDDAWELGRLLRALDTRNRRVLVLDRARSFVHNLHQALRDAERIRSVEDLQQFAGQGGGIGVAEIIK GLVGADVHGLEAMVVCRTYLSNYAAQRSIIVPIMLHKIRLEPKDVFDDNPLDALRLEALESVLYDLAIVAGRAVRSEGDE YPFTVLLGAGTVVRVAQNYPDHAMEIYENFVETFKDELDPEVRVYDLGSKSEVPLEELEDVEVKKFEELSEDERKELVNW MNGQIAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28184; Mature: 28184
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVFYLLPLYIKSDDAWELGRLLRALDTRNRRVLVLDRARSFVHNLHQALRDAERIRSV CCHHHEEHHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH EDLQQFAGQGGGIGVAEIIKGLVGADVHGLEAMVVCRTYLSNYAAQRSIIVPIMLHKIRL HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC EPKDVFDDNPLDALRLEALESVLYDLAIVAGRAVRSEGDEYPFTVLLGAGTVVRVAQNYP CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCC DHAMEIYENFVETFKDELDPEVRVYDLGSKSEVPLEELEDVEVKKFEELSEDERKELVNW HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHCHHHHHHHHHH MNGQIAVR CCCCEEEC >Mature Secondary Structure MRAVFYLLPLYIKSDDAWELGRLLRALDTRNRRVLVLDRARSFVHNLHQALRDAERIRSV CCHHHEEHHHHCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH EDLQQFAGQGGGIGVAEIIKGLVGADVHGLEAMVVCRTYLSNYAAQRSIIVPIMLHKIRL HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC EPKDVFDDNPLDALRLEALESVLYDLAIVAGRAVRSEGDEYPFTVLLGAGTVVRVAQNYP CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCC DHAMEIYENFVETFKDELDPEVRVYDLGSKSEVPLEELEDVEVKKFEELSEDERKELVNW HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHCHHHHHHHHHH MNGQIAVR CCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA