| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094839
Identifier: 20094839
GI number: 20094839
Start: 1426968
End: 1428236
Strand: Reverse
Name: 20094839
Synonym: MK1403
Alternate gene names: NA
Gene position: 1428236-1426968 (Counterclockwise)
Preceding gene: 20094840
Following gene: 20094838
Centisome position: 84.26
GC content: 61.7
Gene sequence:
>1269_bases TTGAGCTGCGGGGAAGACAAGGAAGTCCTGTTCGAAGCTCTGGACGCCGTCGAGGAGAAGTACGACCTGAGGAAGTCGCA GTACGAGATGTTGGAAGAAATCCGCGATCAGCTGGCCGAGTGCGACAGCGTGGCCGTGCTCACCACGCGGCCCGGGTCGG GTAAAACCTGGTTATTGCGGAGGATAGCCAGGGAGTACCGGGAAAGGGTGTTCTACTCCGTCCCGTCACCGGACCTAGCG GAGCGGGAGTACAAGAAGTTCAAGGAGTGGGAGCTCAGCGTCGATCTGTGGCGCAGGGTGGAGGATTACGACGAACCGTG TCAGGTTAAGCTGCCGGAGCTCCTCGGAGAGTTGGAACAGGAGGAGCTCTTCGAGGTCATGGCACACGCGGGCTCGGCGC AGGACGAACCGAAGTGTTACCCGTGGTTTTACCGGAAAGAGGGTCCGCTGCTGAAACCGCTGGAGGACGAGGAGCTACGG GAGAAGGTCCGCAGGGCCCTGTACAGGGAGAACCCGTTCATCAAGGGGTTCGCTCCCTGGGACTCCTGTGGGAACTGCGA GATCATCCGTCAGTTACGTGAGCCGGCCAGGATCGTCTGTCTCTCCTTCAAGAAGCTGCTGTCGGCCCCGTTCCTGTACG CGTCGCACCGTTGTGCACGTGAGGCGTTGGGTAAGGAACCGTTCGTGTCTGAAGAGGACTGGGAAGAAGCGCTGGAGGGC TCGCTCGTGGTCCTGGACGACGCCCACGTGCTCCCTGGAGCGCTCATAGTGGAGATCAGGGGGTACGTGAGAGTCGGCTC ACGCACGCTGATGGATGAGTTGAAGGACCTGGCCCTGGACCAGTCTCACATGTGGAGTGTCGTGGACTGGAACCGCGACG TCCGGAAGGTGAAGAAGGCGCTGGAGGAGAAGACCAAGTTCCGAGAGGTCTACGACCGGTTGACGTACGAGCTCGAGGAC TGGATAGAGGAACTCCGAGAGCTCGTCGAGAGGGAGTGCAGGGCCGACTACCTCGACGCCAAGAAGAACCTGTCGCTGCT GAACGAGCTGATCGAGAGGTCGGAGGAAGCCGGGATCAGGGAGTGGGTGGTAGTGAAGAGTCCGCGTCGCGGGCGGCCGA TCCTGACGTTCGCGCCAGTCGTGAAGAACCTGGAGCAGCTGCTGAAGCTGCTCATGGGCCCCGAGTACTTCGAGCTCCCG GTGGCGTACCTCGTGGCCGAGAACCGGCCCACCCTGAGCGAGCTGGACCGCCGGGGTGTGGGAGTGTGA
Upstream 100 bases:
>100_bases TGGAGCTGGACCGTGAGGTGGTGGTGGAGCCCGGCGACCGGTTCCTGGTGACCGTGGGCAACGAGCCGGCGGTGCTCGGT GTCGTCGAGGGGGTGGCGCG
Downstream 100 bases:
>100_bases GGGCTGTCTTCTACCTACTGCCCTTGTACATAAAGTCGGACGACGCGTGGGAACTCGGGAGACTGCTCCGGGCCCTGGAC ACCAGAAACCGTAGGGTTCT
Product: P-loop ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSCGEDKEVLFEALDAVEEKYDLRKSQYEMLEEIRDQLAECDSVAVLTTRPGSGKTWLLRRIAREYRERVFYSVPSPDLA EREYKKFKEWELSVDLWRRVEDYDEPCQVKLPELLGELEQEELFEVMAHAGSAQDEPKCYPWFYRKEGPLLKPLEDEELR EKVRRALYRENPFIKGFAPWDSCGNCEIIRQLREPARIVCLSFKKLLSAPFLYASHRCAREALGKEPFVSEEDWEEALEG SLVVLDDAHVLPGALIVEIRGYVRVGSRTLMDELKDLALDQSHMWSVVDWNRDVRKVKKALEEKTKFREVYDRLTYELED WIEELRELVERECRADYLDAKKNLSLLNELIERSEEAGIREWVVVKSPRRGRPILTFAPVVKNLEQLLKLLMGPEYFELP VAYLVAENRPTLSELDRRGVGV
Sequences:
>Translated_422_residues MSCGEDKEVLFEALDAVEEKYDLRKSQYEMLEEIRDQLAECDSVAVLTTRPGSGKTWLLRRIAREYRERVFYSVPSPDLA EREYKKFKEWELSVDLWRRVEDYDEPCQVKLPELLGELEQEELFEVMAHAGSAQDEPKCYPWFYRKEGPLLKPLEDEELR EKVRRALYRENPFIKGFAPWDSCGNCEIIRQLREPARIVCLSFKKLLSAPFLYASHRCAREALGKEPFVSEEDWEEALEG SLVVLDDAHVLPGALIVEIRGYVRVGSRTLMDELKDLALDQSHMWSVVDWNRDVRKVKKALEEKTKFREVYDRLTYELED WIEELRELVERECRADYLDAKKNLSLLNELIERSEEAGIREWVVVKSPRRGRPILTFAPVVKNLEQLLKLLMGPEYFELP VAYLVAENRPTLSELDRRGVGV >Mature_421_residues SCGEDKEVLFEALDAVEEKYDLRKSQYEMLEEIRDQLAECDSVAVLTTRPGSGKTWLLRRIAREYRERVFYSVPSPDLAE REYKKFKEWELSVDLWRRVEDYDEPCQVKLPELLGELEQEELFEVMAHAGSAQDEPKCYPWFYRKEGPLLKPLEDEELRE KVRRALYRENPFIKGFAPWDSCGNCEIIRQLREPARIVCLSFKKLLSAPFLYASHRCAREALGKEPFVSEEDWEEALEGS LVVLDDAHVLPGALIVEIRGYVRVGSRTLMDELKDLALDQSHMWSVVDWNRDVRKVKKALEEKTKFREVYDRLTYELEDW IEELRELVERECRADYLDAKKNLSLLNELIERSEEAGIREWVVVKSPRRGRPILTFAPVVKNLEQLLKLLMGPEYFELPV AYLVAENRPTLSELDRRGVGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49486; Mature: 49355
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCGEDKEVLFEALDAVEEKYDLRKSQYEMLEEIRDQLAECDSVAVLTTRPGSGKTWLLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH RIAREYRERVFYSVPSPDLAEREYKKFKEWELSVDLWRRVEDYDEPCQVKLPELLGELEQ HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCH EELFEVMAHAGSAQDEPKCYPWFYRKEGPLLKPLEDEELREKVRRALYRENPFIKGFAPW HHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCC DSCGNCEIIRQLREPARIVCLSFKKLLSAPFLYASHRCAREALGKEPFVSEEDWEEALEG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC SLVVLDDAHVLPGALIVEIRGYVRVGSRTLMDELKDLALDQSHMWSVVDWNRDVRKVKKA CEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH LEEKTKFREVYDRLTYELEDWIEELRELVERECRADYLDAKKNLSLLNELIERSEEAGIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWVVVKSPRRGRPILTFAPVVKNLEQLLKLLMGPEYFELPVAYLVAENRPTLSELDRRGV EEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHCCHHHHEECCCCCHHHHHHCCC GV CC >Mature Secondary Structure SCGEDKEVLFEALDAVEEKYDLRKSQYEMLEEIRDQLAECDSVAVLTTRPGSGKTWLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHH RIAREYRERVFYSVPSPDLAEREYKKFKEWELSVDLWRRVEDYDEPCQVKLPELLGELEQ HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHCCH EELFEVMAHAGSAQDEPKCYPWFYRKEGPLLKPLEDEELREKVRRALYRENPFIKGFAPW HHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCC DSCGNCEIIRQLREPARIVCLSFKKLLSAPFLYASHRCAREALGKEPFVSEEDWEEALEG CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC SLVVLDDAHVLPGALIVEIRGYVRVGSRTLMDELKDLALDQSHMWSVVDWNRDVRKVKKA CEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH LEEKTKFREVYDRLTYELEDWIEELRELVERECRADYLDAKKNLSLLNELIERSEEAGIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWVVVKSPRRGRPILTFAPVVKNLEQLLKLLMGPEYFELPVAYLVAENRPTLSELDRRGV EEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHCCHHHHEECCCCCHHHHHHCCC GV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA