| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094566
Identifier: 20094566
GI number: 20094566
Start: 1105400
End: 1105687
Strand: Direct
Name: 20094566
Synonym: MK1130
Alternate gene names: NA
Gene position: 1105400-1105687 (Clockwise)
Preceding gene: 20094565
Following gene: 20094568
Centisome position: 65.22
GC content: 63.54
Gene sequence:
>288_bases ATGACGGCCCGTCGTTTCCGCCCGGGCACACCCGTTCTCCTCCCCGTGATCCGGTTCTTCGGGCGCGTGATCGTCACTCC GTTCTGTTTCACGGTAGGGAGGGAACCCGTCCCGTGTCGTGTAGTGGTGTCCTACGGTCGCGGGGCCGGTCCGGTGGATT TCCGTGAGCTTAAGGTTGAGTCCGTTAACTTCCCGATGTGTCCGGTGTCACTCCCGTTGGCGGTGGGCTTCGGTGTGCGA GTTCTCGGGGAGCGATCGGTGTACCGCCGATCGGGGCGCCATTCCTAA
Upstream 100 bases:
>100_bases CGTGGTACCGGGGTGAAGTAAAAGCACCAGAACCGTGAGCTTCCGGTCCGGGGCCCGGGTCGTCCCGGCGGGTCGGGAGA GCGGGGCGGACCCCCGCCCG
Downstream 100 bases:
>100_bases GTCTCAGTAAGGTTCCCTACGGGCTCCGGCACCGTCGGTGGCTCCAGTGGGGTTATGTGGGTTCGAAAGTCATCCCATTA GCCGCTGTTTTGAATTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVESVNFPMCPVSLPLAVGFGVR VLGERSVYRRSGRHS
Sequences:
>Translated_95_residues MTARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVESVNFPMCPVSLPLAVGFGVR VLGERSVYRRSGRHS >Mature_94_residues TARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVESVNFPMCPVSLPLAVGFGVRV LGERSVYRRSGRHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10564; Mature: 10432
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHEEEE SVNFPMCPVSLPLAVGFGVRVLGERSVYRRSGRHS CCCCCCCCCCCCHHHCCCEEEECCHHHHHCCCCCC >Mature Secondary Structure TARRFRPGTPVLLPVIRFFGRVIVTPFCFTVGREPVPCRVVVSYGRGAGPVDFRELKVE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHEEEE SVNFPMCPVSLPLAVGFGVRVLGERSVYRRSGRHS CCCCCCCCCCCCHHHCCCEEEECCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA