Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094565

Identifier: 20094565

GI number: 20094565

Start: 1104523

End: 1105320

Strand: Direct

Name: 20094565

Synonym: MK1129

Alternate gene names: NA

Gene position: 1104523-1105320 (Clockwise)

Preceding gene: 20094563

Following gene: 20094566

Centisome position: 65.16

GC content: 66.54

Gene sequence:

>798_bases
TTGAGGCTTCCGGCGATCGCGGCCGGACTGCTGATACTCTTCGCCCAGCCGGCGAGCTGCCTGAAGGTGGCGGTGTTCGC
CGCCGATGACGTGGAACCCACGTGCCTCAAGGCCATCGAGAAGGTACTCCGGGACGCGGGCGTACCATTCGACGAGGTCA
AAGGGAAGGACATCGTCGACGGGACAATCGTCGAGAGGTACGACGTCCTGATCCTGCCCGGTGGCGCGTACTCCGAGCGC
GTCGTGCATCATCCCAGGTTCATCGAGGGGCTGAAGGAGTTCGCGAGGGCGGGCGGCAAGATCGTGGGGATCTGCGCGGG
TGCGATCACGCTGGTCAAGGGTGGGCTGGTCAGGGCGAAGGTGGAGGGAGCGGGTCTCGGCGTGGGTAAGGTGACGCTGG
AGCTCGAGCGCGATCCCCTCACGGAGGGGCTGCCCGACCGCCTCGAGGTCACGTACATCAACGGGCCCGTGATGCGCTCC
CAAGGGGCTAAGGTGGTGGCCCGGTACGCGGGAGGTATCGTGAGTCGCGGGGACGCGATCCTCGTGGACCGCTACGGTAA
GGGCGAGGTGATCGCGATCGGACCGCACCCGTGTCACGACGAGAGGGGGAACGTGAACACCCAGGGCGCCAAGCTGCTGC
TCAACGCCCTGGGCGTGAAGAAGCGGGTCAAATCCGGGAAGGTCGAGGGTGAGGGTTGGTTCCCGACACCGGTTCCGGTA
GCGGCGGTGATCCTGGGACTGGTGGCGGCGCTCGGGGTCCGCGGGCTGATTTCCCGACGTGGTACCGGGGTGAAGTAA

Upstream 100 bases:

>100_bases
TTCTCCCCGTCAATCCTAGGCCCGGTGAAGGCTCGGTGGCTCCGGCGTCTCGAAACGCACAACTGCCTTGTCGTCACTCC
AACCGATTCGGGGGAGACCT

Downstream 100 bases:

>100_bases
AAGCACCAGAACCGTGAGCTTCCGGTCCGGGGCCCGGGTCGTCCCGGCGGGTCGGGAGAGCGGGGCGGACCCCCGCCCGA
TGACGGCCCGTCGTTTCCGC

Product: protease or amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVDGTIVERYDVLILPGGAYSER
VVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAKVEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRS
QGAKVVARYAGGIVSRGDAILVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV
AAVILGLVAALGVRGLISRRGTGVK

Sequences:

>Translated_265_residues
MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVDGTIVERYDVLILPGGAYSER
VVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAKVEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRS
QGAKVVARYAGGIVSRGDAILVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV
AAVILGLVAALGVRGLISRRGTGVK
>Mature_265_residues
MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVDGTIVERYDVLILPGGAYSER
VVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAKVEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRS
QGAKVVARYAGGIVSRGDAILVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV
AAVILGLVAALGVRGLISRRGTGVK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27776; Mature: 27776

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVD
CCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCC
GTIVERYDVLILPGGAYSERVVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAK
CCEEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCEEEEE
VEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRSQGAKVVARYAGGIVSRGDAI
ECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHCCEECCCCEE
LVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV
EEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
AAVILGLVAALGVRGLISRRGTGVK
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVD
CCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCC
GTIVERYDVLILPGGAYSERVVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAK
CCEEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCEEEEE
VEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRSQGAKVVARYAGGIVSRGDAI
ECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHCCEECCCCEE
LVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV
EEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
AAVILGLVAALGVRGLISRRGTGVK
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA