| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094565
Identifier: 20094565
GI number: 20094565
Start: 1104523
End: 1105320
Strand: Direct
Name: 20094565
Synonym: MK1129
Alternate gene names: NA
Gene position: 1104523-1105320 (Clockwise)
Preceding gene: 20094563
Following gene: 20094566
Centisome position: 65.16
GC content: 66.54
Gene sequence:
>798_bases TTGAGGCTTCCGGCGATCGCGGCCGGACTGCTGATACTCTTCGCCCAGCCGGCGAGCTGCCTGAAGGTGGCGGTGTTCGC CGCCGATGACGTGGAACCCACGTGCCTCAAGGCCATCGAGAAGGTACTCCGGGACGCGGGCGTACCATTCGACGAGGTCA AAGGGAAGGACATCGTCGACGGGACAATCGTCGAGAGGTACGACGTCCTGATCCTGCCCGGTGGCGCGTACTCCGAGCGC GTCGTGCATCATCCCAGGTTCATCGAGGGGCTGAAGGAGTTCGCGAGGGCGGGCGGCAAGATCGTGGGGATCTGCGCGGG TGCGATCACGCTGGTCAAGGGTGGGCTGGTCAGGGCGAAGGTGGAGGGAGCGGGTCTCGGCGTGGGTAAGGTGACGCTGG AGCTCGAGCGCGATCCCCTCACGGAGGGGCTGCCCGACCGCCTCGAGGTCACGTACATCAACGGGCCCGTGATGCGCTCC CAAGGGGCTAAGGTGGTGGCCCGGTACGCGGGAGGTATCGTGAGTCGCGGGGACGCGATCCTCGTGGACCGCTACGGTAA GGGCGAGGTGATCGCGATCGGACCGCACCCGTGTCACGACGAGAGGGGGAACGTGAACACCCAGGGCGCCAAGCTGCTGC TCAACGCCCTGGGCGTGAAGAAGCGGGTCAAATCCGGGAAGGTCGAGGGTGAGGGTTGGTTCCCGACACCGGTTCCGGTA GCGGCGGTGATCCTGGGACTGGTGGCGGCGCTCGGGGTCCGCGGGCTGATTTCCCGACGTGGTACCGGGGTGAAGTAA
Upstream 100 bases:
>100_bases TTCTCCCCGTCAATCCTAGGCCCGGTGAAGGCTCGGTGGCTCCGGCGTCTCGAAACGCACAACTGCCTTGTCGTCACTCC AACCGATTCGGGGGAGACCT
Downstream 100 bases:
>100_bases AAGCACCAGAACCGTGAGCTTCCGGTCCGGGGCCCGGGTCGTCCCGGCGGGTCGGGAGAGCGGGGCGGACCCCCGCCCGA TGACGGCCCGTCGTTTCCGC
Product: protease or amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVDGTIVERYDVLILPGGAYSER VVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAKVEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRS QGAKVVARYAGGIVSRGDAILVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV AAVILGLVAALGVRGLISRRGTGVK
Sequences:
>Translated_265_residues MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVDGTIVERYDVLILPGGAYSER VVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAKVEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRS QGAKVVARYAGGIVSRGDAILVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV AAVILGLVAALGVRGLISRRGTGVK >Mature_265_residues MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVDGTIVERYDVLILPGGAYSER VVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAKVEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRS QGAKVVARYAGGIVSRGDAILVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV AAVILGLVAALGVRGLISRRGTGVK
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27776; Mature: 27776
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVD CCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCC GTIVERYDVLILPGGAYSERVVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAK CCEEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCEEEEE VEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRSQGAKVVARYAGGIVSRGDAI ECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHCCEECCCCEE LVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV EEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AAVILGLVAALGVRGLISRRGTGVK HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRLPAIAAGLLILFAQPASCLKVAVFAADDVEPTCLKAIEKVLRDAGVPFDEVKGKDIVD CCCCHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCC GTIVERYDVLILPGGAYSERVVHHPRFIEGLKEFARAGGKIVGICAGAITLVKGGLVRAK CCEEEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCEEEEE VEGAGLGVGKVTLELERDPLTEGLPDRLEVTYINGPVMRSQGAKVVARYAGGIVSRGDAI ECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCEECCCCHHHHHHHHCCEECCCCEE LVDRYGKGEVIAIGPHPCHDERGNVNTQGAKLLLNALGVKKRVKSGKVEGEGWFPTPVPV EEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AAVILGLVAALGVRGLISRRGTGVK HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA