Click here to switch to the map view.

The map label for this gene is 20094568

Identifier: 20094568

GI number: 20094568

Start: 1109620

End: 1110027

Strand: Direct

Name: 20094568

Synonym: MK1132

Alternate gene names: NA

Gene position: 1109620-1110027 (Clockwise)

Preceding gene: 20094566

Following gene: 20094570

Centisome position: 65.47

GC content: 69.85

Gene sequence:

>408_bases
ATGGACGTGGACACGGAAGAGCTCGTTCGGATGGCCGAGTGGAAGCTCTCGGAGGCCGAGCGCGCGCTGGAGGAGGGCCC
GGAGTCGCCCGCGGTCGCCGAGGCGCATCAGGCCGTCGAGCTCCTCGTCAAGGCCGCGCTTCGGGAGCTGGACGTCGAGC
CACCGAGGACTCACGATATCCGACGGCTCCTCGGCGTGCTCACGACGGAGCTGCTGGACCTGGGCGAAGGGGACCTGGCG
GTCGAGGTCCGACGGATCGCCAGGGAGCACCGCGACACGCTGGCGTCGCTCCTGGAGGGGTACTTCTCCCTGTTCGAGCC
GCCCTTCGAGGGAGACGCCGAGGAGGTCGTGCGGGCGGCCGGGAAGGTCTTCGAGGACCTCCGCCGGATCCTGGAGAAGG
TACGCTAG

Upstream 100 bases:

>100_bases
GCCGGATCCTGTGGAGGTCCCGGAGCACCTCGACAGGTGCAGGTCGATCGTGGGGCGGCTCCGGGACGCGCTCCCCGTCG
GGCTACCGGTTCCGGGAGGT

Downstream 100 bases:

>100_bases
ATACCGGGGGACTGACGTCACCCTCGGCACCGCGGACGGGTCGTCACCCTCCCCATAGGCCTTCATTCGAGCTCAGGTAT
TTCCAGGCCTTCCGCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDVDTEELVRMAEWKLSEAERALEEGPESPAVAEAHQAVELLVKAALRELDVEPPRTHDIRRLLGVLTTELLDLGEGDLA
VEVRRIAREHRDTLASLLEGYFSLFEPPFEGDAEEVVRAAGKVFEDLRRILEKVR

Sequences:

>Translated_135_residues
MDVDTEELVRMAEWKLSEAERALEEGPESPAVAEAHQAVELLVKAALRELDVEPPRTHDIRRLLGVLTTELLDLGEGDLA
VEVRRIAREHRDTLASLLEGYFSLFEPPFEGDAEEVVRAAGKVFEDLRRILEKVR
>Mature_135_residues
MDVDTEELVRMAEWKLSEAERALEEGPESPAVAEAHQAVELLVKAALRELDVEPPRTHDIRRLLGVLTTELLDLGEGDLA
VEVRRIAREHRDTLASLLEGYFSLFEPPFEGDAEEVVRAAGKVFEDLRRILEKVR

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15256; Mature: 15256

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVDTEELVRMAEWKLSEAERALEEGPESPAVAEAHQAVELLVKAALRELDVEPPRTHDI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RRLLGVLTTELLDLGEGDLAVEVRRIAREHRDTLASLLEGYFSLFEPPFEGDAEEVVRAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GKVFEDLRRILEKVR
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVDTEELVRMAEWKLSEAERALEEGPESPAVAEAHQAVELLVKAALRELDVEPPRTHDI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RRLLGVLTTELLDLGEGDLAVEVRRIAREHRDTLASLLEGYFSLFEPPFEGDAEEVVRAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GKVFEDLRRILEKVR
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA