| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093936
Identifier: 20093936
GI number: 20093936
Start: 459523
End: 460449
Strand: Reverse
Name: 20093936
Synonym: MK0498
Alternate gene names: NA
Gene position: 460449-459523 (Counterclockwise)
Preceding gene: 20093937
Following gene: 20093935
Centisome position: 27.17
GC content: 59.65
Gene sequence:
>927_bases GTGGAAAGGATTCGAGCACGGTTGAACCTAGGGGAAACGTTGTTGGAATGGGAGCGTGTGTTGGCCCGGTGTGACGGTTG CGGGGCTTGCGAATCCAGATGTCCGAACGACGTACCCAGAAGATTGTTCAACGTGCTCGCTGCCTCGGGTCGATTCGAGG AGGCGTTGAGCGTAGCTTCCGACTGCACGGTGTGTGGTCTTTGTGAGCGGCTGTGCCCACACAACATCCCCTACACGGAG GTGATCACCGATCTGAGGAGGGAGGAACCCACCCCAGAGGCCGTGCGAAGAGTCCGGCGGACGGGTACCCCGTACGGACG GAAGCTCGCCGATGAATCCGAGCCTCTACAGGGCGACGGAGTAGCGATCTTAGGATGCACTATCAGAAGTCGGCCGGAGT GGCTCCGACGGGTCATCGAAATCGTGCGCCGCGCGGGGTTGGCGACCTTAGGCGAGGATGAACCTTGCTGTATGAACTTC GCTCGGAAGCGTGGCGAGGAAGTCCCCGAGGAGACTGTGCAAAGGTGGTGCTCGCTGTTCGATGATTTCGACACCGTAGT GGTGTTTTGCCCGGGTTGTTACGATTTCTGTGTGGAAGTGCTCGACGAGCGTCCGCTGTACTACGCCGAGATAGCGGAGT TCGACGGGATACCGGAAGGTGCCGCTTACAAATCACCGTGCCACCTCGTGAGGCATGGAGTGGATGACCATGTCCTGGAG CGCCTTCCCGACGTTGAGTTACCACCACGTAGGCATCGATGTTGCGGCGGCGGGGCACTCGTGAGGAAGCCTTCGGAGTC CACGGTGAGGGCGTACGAACGGCTCGGAAAACCCGTCCTCACACCCTGCCCTATGTGCGTCACCACACTCGAGGGAGTTA TTGACGTAAGGCCGCTGTGGGATCACGTCGTCGATTTATCCCGATGA
Upstream 100 bases:
>100_bases TCGACTCCGGTCTTATCCCGGAAGAACTCGCGGAGCTCGCACTGGAGACCGCTAAGAGGGTCGAAAAACGTGGGATGAAG GAGGTCAAGCCCTACCCCGT
Downstream 100 bases:
>100_bases CGAACCCGCTGTCTGCCGACCACTCCTAGGGTGACGAGGTTACGCACTCCCTGAGGGGTCTCGGCTTGACGTTGGACGAA CGCGATCTGGAGCTCATCCG
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVASDCTVCGLCERLCPHNIPYTE VITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDGVAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNF ARKRGEEVPEETVQRWCSLFDDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLWDHVVDLSR
Sequences:
>Translated_308_residues MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVASDCTVCGLCERLCPHNIPYTE VITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDGVAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNF ARKRGEEVPEETVQRWCSLFDDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLWDHVVDLSR >Mature_308_residues MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVASDCTVCGLCERLCPHNIPYTE VITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDGVAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNF ARKRGEEVPEETVQRWCSLFDDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLWDHVVDLSR
Specific function: Unknown
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34741; Mature: 34741
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVAS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH DCTVCGLCERLCPHNIPYTEVITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDG CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCC VAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNFARKRGEEVPEETVQRWCSLF EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH DDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE HCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHH RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLW HCCCCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHH DHVVDLSR HHHHHCCC >Mature Secondary Structure MERIRARLNLGETLLEWERVLARCDGCGACESRCPNDVPRRLFNVLAASGRFEEALSVAS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH DCTVCGLCERLCPHNIPYTEVITDLRREEPTPEAVRRVRRTGTPYGRKLADESEPLQGDG CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCC VAILGCTIRSRPEWLRRVIEIVRRAGLATLGEDEPCCMNFARKRGEEVPEETVQRWCSLF EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH DDFDTVVVFCPGCYDFCVEVLDERPLYYAEIAEFDGIPEGAAYKSPCHLVRHGVDDHVLE HCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHH RLPDVELPPRRHRCCGGGALVRKPSESTVRAYERLGKPVLTPCPMCVTTLEGVIDVRPLW HCCCCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHH DHVVDLSR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA