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The map label for this gene is rps27e

Identifier: 20093856

GI number: 20093856

Start: 394669

End: 394890

Strand: Direct

Name: rps27e

Synonym: MK0418

Alternate gene names: 20093856

Gene position: 394669-394890 (Clockwise)

Preceding gene: 20093855

Following gene: 20093857

Centisome position: 23.28

GC content: 56.76

Gene sequence:

>222_bases
TTGGATGAGAAGCGATTCCTGAAGAGGTTCACCGAGTCCGATCTCGTACCGCAGCCTCGTAGCAGGTTCCTCCGCGTGGA
GTGCGTGGATTGTGGTAACGAGCAGATCATATTCGGAAACGCGAGCACCGAGGTAAAGTGCCACATCTGCGGCCGCACCC
TAGCCAAGCCGACCGGCGGTAAGGCCAAGATCCTCACTAAGATCAAGGAGGTGCTCGAGTAA

Upstream 100 bases:

>100_bases
ACCTGCGCTACCGGTGCACCGAGTGTGGTAAAGCTCACACCCGGAAGGGTTGGCGAGCCGGCACCCTCGAGATCACCGAG
GAGTAGGGGGTGAGATCGCT

Downstream 100 bases:

>100_bases
TGCCCCGGAAGTTACGCGATCTTCCCGAAGAAGGCGAGATAGTGATGGCCACGGTAGAGCGTGTCGAGGACCACGGAGCC
TTCGTCACGCTGGACGAGTA

Product: 30S ribosomal protein S27e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MDEKRFLKRFTESDLVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKILTKIKEVLE

Sequences:

>Translated_73_residues
MDEKRFLKRFTESDLVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKILTKIKEVLE
>Mature_73_residues
MDEKRFLKRFTESDLVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKILTKIKEVLE

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27_METKA (Q8TY87)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613703.1
- ProteinModelPortal:   Q8TY87
- SMR:   Q8TY87
- GeneID:   1477721
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0418
- NMPDR:   fig|190192.1.peg.416
- HOGENOM:   HBG392194
- OMA:   IFGCPAT
- ProtClustDB:   PRK00415
- BioCyc:   MKAN190192:MK0418-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00371
- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332
- PANTHER:   PTHR11594

Pfam domain/function: PF01667 Ribosomal_S27e; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 8281; Mature: 8281

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKRFLKRFTESDLVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGG
CCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCC
KAKILTKIKEVLE
CHHHHHHHHHHHC
>Mature Secondary Structure
MDEKRFLKRFTESDLVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGG
CCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCC
KAKILTKIKEVLE
CHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014