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The map label for this gene is rpl44e [H]

Identifier: 20093855

GI number: 20093855

Start: 394373

End: 394654

Strand: Direct

Name: rpl44e [H]

Synonym: MK0417

Alternate gene names: 20093855

Gene position: 394373-394654 (Clockwise)

Preceding gene: 20093854

Following gene: 20093856

Centisome position: 23.27

GC content: 59.93

Gene sequence:

>282_bases
TTGGCTAAGATCCCGAAGAAAATCCGGACGTACTGCCCGTACTGCCGGAAACACACCATCCACGAGGTAGAGCGCGCCAA
GAAGAACCCCGCGAGAAAGATGTCGTGGGGACAGCGTCAGTTCGAGCGCGTCCTGAAAGGATACGGTGGATTCCCACGTC
CCAAGCCGTCGGGCGAGAAACCCACGAAGAAAGTGGACCTGCGCTACCGGTGCACCGAGTGTGGTAAAGCTCACACCCGG
AAGGGTTGGCGAGCCGGCACCCTCGAGATCACCGAGGAGTAG

Upstream 100 bases:

>100_bases
TTAATGGTCGGGGAGACGGCCGCGCGGATCCTCTCGGAACGGGGGCGTCGATGGGGCGGTCCCTTCGCGGAACACGTCCG
GAGGTGGAGGGGGTGAGTCG

Downstream 100 bases:

>100_bases
GGGGTGAGATCGCTTTGGATGAGAAGCGATTCCTGAAGAGGTTCACCGAGTCCGATCTCGTACCGCAGCCTCGTAGCAGG
TTCCTCCGCGTGGAGTGCGT

Product: 50S ribosomal protein L44e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MAKIPKKIRTYCPYCRKHTIHEVERAKKNPARKMSWGQRQFERVLKGYGGFPRPKPSGEKPTKKVDLRYRCTECGKAHTR
KGWRAGTLEITEE

Sequences:

>Translated_93_residues
MAKIPKKIRTYCPYCRKHTIHEVERAKKNPARKMSWGQRQFERVLKGYGGFPRPKPSGEKPTKKVDLRYRCTECGKAHTR
KGWRAGTLEITEE
>Mature_92_residues
AKIPKKIRTYCPYCRKHTIHEVERAKKNPARKMSWGQRQFERVLKGYGGFPRPKPSGEKPTKKVDLRYRCTECGKAHTRK
GWRAGTLEITEE

Specific function: Unknown

COG id: COG1631

COG function: function code J; Ribosomal protein L44E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L44e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000552
- InterPro:   IPR011332
- ProDom:   PD002841 [H]

Pfam domain/function: PF00935 Ribosomal_L44 [H]

EC number: NA

Molecular weight: Translated: 10918; Mature: 10787

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: PS01172 RIBOSOMAL_L44E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIPKKIRTYCPYCRKHTIHEVERAKKNPARKMSWGQRQFERVLKGYGGFPRPKPSGEK
CCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
PTKKVDLRYRCTECGKAHTRKGWRAGTLEITEE
CCCCCCHHHHCCHHCHHHCCCCCCCCCEEECCC
>Mature Secondary Structure 
AKIPKKIRTYCPYCRKHTIHEVERAKKNPARKMSWGQRQFERVLKGYGGFPRPKPSGEK
CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
PTKKVDLRYRCTECGKAHTRKGWRAGTLEITEE
CCCCCCHHHHCCHHCHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]