Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093668

Identifier: 20093668

GI number: 20093668

Start: 214814

End: 215236

Strand: Direct

Name: 20093668

Synonym: MK0228

Alternate gene names: NA

Gene position: 214814-215236 (Clockwise)

Preceding gene: 20093664

Following gene: 20093669

Centisome position: 12.67

GC content: 60.05

Gene sequence:

>423_bases
GTGCCGTGGGAGGAGATCGAGCACACGGCGGATGCCGCGTTCCGAGTGTGGGCCGACACGCCTGAGGATCTCCTGGTTGA
AGCCGCCAAGGCGCTGTTCGATCTGATCACGGACCTGGACGCGGTGGAACCCGAGGAGGAGGTGGAGATCGAGGCGGAAG
GAGGAGACCTAGTGGAGTTACTACACGACTGGCTCGAGGAGATACACTTCCGACACGAGATCGATGGAATGCTGTTCTCC
GACTTCGAAGTGAAGGAACTGAAGAAAGAGGAAGGATGGAAGGTACGTGGCGTAGCCCGAGGTGAGCCCTACGACCCGGA
CCGACATCCGTTCCACACCGAGGTCAAGGCCGTGACCTACCACAACATGAAGGTCGAGCGCGAAGACGGACGGTGGGTAG
CCGAGTACGTGGTCGACTTGTGA

Upstream 100 bases:

>100_bases
ATCCTTCCGGGAATCGCCAAGCACACGTCGTCCACACCCCGCTGGGTTGAACCGAAGAACTTCTTTCGTATTTTCTCCCG
AGGGCCAGGGGGAAGCTCCG

Downstream 100 bases:

>100_bases
AGGGGGCAGGTCGATCTTTGAACCTGGACCGTTATCGGAACATCGTCCGTGAGACGGAGCGGAAGTACATCAATGTGAAC
CCTATCCAACGAGGGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVELLHDWLEEIHFRHEIDGMLFS
DFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTYHNMKVEREDGRWVAEYVVDL

Sequences:

>Translated_140_residues
MPWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVELLHDWLEEIHFRHEIDGMLFS
DFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTYHNMKVEREDGRWVAEYVVDL
>Mature_139_residues
PWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVELLHDWLEEIHFRHEIDGMLFSD
FEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTYHNMKVEREDGRWVAEYVVDL

Specific function: Unknown

COG id: COG1371

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0211 (archease) family

Homologues:

Organism=Homo sapiens, GI30425510, Length=129, Percent_Identity=37.984496124031, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648776, Length=126, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y228_METKA (Q8TYR4)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613515.1
- ProteinModelPortal:   Q8TYR4
- SMR:   Q8TYR4
- GeneID:   1477531
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0228
- NMPDR:   fig|190192.1.peg.228
- HOGENOM:   HBG729173
- OMA:   ELLFLFD
- BioCyc:   MKAN190192:MK0228-MONOMER
- HAMAP:   MF_01222
- InterPro:   IPR002804
- InterPro:   IPR022952
- Gene3D:   G3DSA:3.55.10.10
- PANTHER:   PTHR12682

Pfam domain/function: PF01951 DUF101; SSF69819 DUF101

EC number: NA

Molecular weight: Translated: 16358; Mature: 16227

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVEL
CCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH
LHDWLEEIHFRHEIDGMLFSDFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTY
HHHHHHHHHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHEEEEE
HNMKVEREDGRWVAEYVVDL
ECEEEECCCCCCHHHHHHCC
>Mature Secondary Structure 
PWEEIEHTADAAFRVWADTPEDLLVEAAKALFDLITDLDAVEPEEEVEIEAEGGDLVEL
CHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHH
LHDWLEEIHFRHEIDGMLFSDFEVKELKKEEGWKVRGVARGEPYDPDRHPFHTEVKAVTY
HHHHHHHHHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHEEEEE
HNMKVEREDGRWVAEYVVDL
ECEEEECCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014