Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093614

Identifier: 20093614

GI number: 20093614

Start: 170173

End: 170856

Strand: Direct

Name: 20093614

Synonym: MK0174

Alternate gene names: NA

Gene position: 170173-170856 (Clockwise)

Preceding gene: 20093611

Following gene: 20093615

Centisome position: 10.04

GC content: 58.92

Gene sequence:

>684_bases
CTGGATTCTATCGAGAAATACCTTTTGGTGACGCGAAGGATGGTGAACGCCGGGATACCTAAAGATCGGGCGTTGAACAC
CGTACAGCGCACCTGGGGACTCACAAATAGGGAGAAGAAAGCGCTATACCGTATCGTGTGGTCGAGACTGGAATCATTAC
TCAGAGCCGGCAAAAGGGTCCCGACGCCGCTTCTCAGAGGGCAGGACTTGGTAATCGACGGGTACAACGTGCTTGTCGGG
CTGGCGTCCCTGGACGCCGGGGAAGCCGTACTCTGCGACGACGACGTGGTGCGTGACTTACGGATGTCTCCCAAGTTGGA
GGAGGAAGAGGTGCAGACCGCCCTCGAAATGTTGGAGACGTACCTGCGTCGCGTTGAACCGCGCTCAGTGAGGATACTGT
TCGACGCTCCTGTGAGCGGTAGTGGTGAGCTGGCCGCGCGAGTCGAGCGGTACCTAAAAGACTCGTTGAACGTCCCGGTA
CGGGCCTCGGCCGTCAAAGGTGTGGACGAAAAGCTGGTGAGGGCCCAAGGAGTGCCCGTGACATCCGACTCCGGCATCAT
AGATCGTGTGTCAGCTTATCACGACGCCGTCAGGGAAGTGGCGGCCGCAGAAGGTATAGCCGTATGGATCCCGCCGGGAC
CTTCCGAGCCCAAGTTCGTACGTGCTCTCGTCCCGGAAGGGTAA

Upstream 100 bases:

>100_bases
TTGGAGTCTCCGCCCACACCCCGGTTCCTCCTCATCGGGGTCGGCGTGGGGTAGCATCGTCATCGACGGGGTGGCATTCG
GGATGGTGGCCAGGGACCTT

Downstream 100 bases:

>100_bases
GGATGATGATCACGGGACCGGGATCGAGGGTAATCCGATGAGAGTAAGCGGCCACACCTGACTTAGGGGAACCGCGAATG
GTTCGGAGAACCTCTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDSIEKYLLVTRRMVNAGIPKDRALNTVQRTWGLTNREKKALYRIVWSRLESLLRAGKRVPTPLLRGQDLVIDGYNVLVG
LASLDAGEAVLCDDDVVRDLRMSPKLEEEEVQTALEMLETYLRRVEPRSVRILFDAPVSGSGELAARVERYLKDSLNVPV
RASAVKGVDEKLVRAQGVPVTSDSGIIDRVSAYHDAVREVAAAEGIAVWIPPGPSEPKFVRALVPEG

Sequences:

>Translated_227_residues
MDSIEKYLLVTRRMVNAGIPKDRALNTVQRTWGLTNREKKALYRIVWSRLESLLRAGKRVPTPLLRGQDLVIDGYNVLVG
LASLDAGEAVLCDDDVVRDLRMSPKLEEEEVQTALEMLETYLRRVEPRSVRILFDAPVSGSGELAARVERYLKDSLNVPV
RASAVKGVDEKLVRAQGVPVTSDSGIIDRVSAYHDAVREVAAAEGIAVWIPPGPSEPKFVRALVPEG
>Mature_227_residues
MDSIEKYLLVTRRMVNAGIPKDRALNTVQRTWGLTNREKKALYRIVWSRLESLLRAGKRVPTPLLRGQDLVIDGYNVLVG
LASLDAGEAVLCDDDVVRDLRMSPKLEEEEVQTALEMLETYLRRVEPRSVRILFDAPVSGSGELAARVERYLKDSLNVPV
RASAVKGVDEKLVRAQGVPVTSDSGIIDRVSAYHDAVREVAAAEGIAVWIPPGPSEPKFVRALVPEG

Specific function: Unknown

COG id: COG2454

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007368
- ProDom:   PD019177 [H]

Pfam domain/function: PF04256 DUF434 [H]

EC number: NA

Molecular weight: Translated: 25097; Mature: 25097

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSIEKYLLVTRRMVNAGIPKDRALNTVQRTWGLTNREKKALYRIVWSRLESLLRAGKRV
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PTPLLRGQDLVIDGYNVLVGLASLDAGEAVLCDDDVVRDLRMSPKLEEEEVQTALEMLET
CCHHHCCCEEEEECHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHH
YLRRVEPRSVRILFDAPVSGSGELAARVERYLKDSLNVPVRASAVKGVDEKLVRAQGVPV
HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCHHHHHHHHCCCCC
TSDSGIIDRVSAYHDAVREVAAAEGIAVWIPPGPSEPKFVRALVPEG
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MDSIEKYLLVTRRMVNAGIPKDRALNTVQRTWGLTNREKKALYRIVWSRLESLLRAGKRV
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PTPLLRGQDLVIDGYNVLVGLASLDAGEAVLCDDDVVRDLRMSPKLEEEEVQTALEMLET
CCHHHCCCEEEEECHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHH
YLRRVEPRSVRILFDAPVSGSGELAARVERYLKDSLNVPVRASAVKGVDEKLVRAQGVPV
HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHCHHHHHHHHCCCCC
TSDSGIIDRVSAYHDAVREVAAAEGIAVWIPPGPSEPKFVRALVPEG
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]