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The map label for this gene is TroR [C]

Identifier: 20093615

GI number: 20093615

Start: 170934

End: 171410

Strand: Direct

Name: TroR [C]

Synonym: MK0175

Alternate gene names: 20093615

Gene position: 170934-171410 (Clockwise)

Preceding gene: 20093614

Following gene: 20093616

Centisome position: 10.08

GC content: 54.3

Gene sequence:

>477_bases
ATGGTTCGGAGAACCTCTGAAGAGATTTCAGAACGCATGGAAGACTACCTGGAAGCCCTATACCTACTTTCGAGACGCGG
CTCCGGCCGACATGTGAGGATATCGGAACTCAGCGAGTACCTGGAAGTGTCCAAACCGACGGCGTTGGAGATGATCAGAA
AGTTAGCAGATCGCGGCTTAGTAGAGTACGAACGAGGTCTGGTGAAACTCACGGAGAAAGGTCGAGAGATCGGTAAGGAG
GTGTGGGACAGGCACCGGGAGATAGCGTCATTCCTCCGGTTCTTGGGTGTAGATCCGAAGATAGCGGAACGTGACGCATG
CGCTATAGAGCACTCGTTACACCCGCAGTCTTTCCGGAGACTACGAAAACTGTTCCACCTCCTGAAGGAGGCGACCGGGG
AACCGACCGTGCGCGAGATCCTAGATAAAGTGCGGGGGGAAGAGGGAGATTCAGACGGAGTTCGACATCGATCGTAA

Upstream 100 bases:

>100_bases
GTGCTCTCGTCCCGGAAGGGTAAGGATGATGATCACGGGACCGGGATCGAGGGTAATCCGATGAGAGTAAGCGGCCACAC
CTGACTTAGGGGAACCGCGA

Downstream 100 bases:

>100_bases
GACGCTGAAGGCCGGACTCAGAAAGCTCCGGTCACTGGTCAAGGTCAAGATTCGACTAGCTAGGGAGCACGGTACCGTAG
AGGTAGACCGACCTCCTCTA

Product: Mn-dependent transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVRRTSEEISERMEDYLEALYLLSRRGSGRHVRISELSEYLEVSKPTALEMIRKLADRGLVEYERGLVKLTEKGREIGKE
VWDRHREIASFLRFLGVDPKIAERDACAIEHSLHPQSFRRLRKLFHLLKEATGEPTVREILDKVRGEEGDSDGVRHRS

Sequences:

>Translated_158_residues
MVRRTSEEISERMEDYLEALYLLSRRGSGRHVRISELSEYLEVSKPTALEMIRKLADRGLVEYERGLVKLTEKGREIGKE
VWDRHREIASFLRFLGVDPKIAERDACAIEHSLHPQSFRRLRKLFHLLKEATGEPTVREILDKVRGEEGDSDGVRHRS
>Mature_158_residues
MVRRTSEEISERMEDYLEALYLLSRRGSGRHVRISELSEYLEVSKPTALEMIRKLADRGLVEYERGLVKLTEKGREIGKE
VWDRHREIASFLRFLGVDPKIAERDACAIEHSLHPQSFRRLRKLFHLLKEATGEPTVREILDKVRGEEGDSDGVRHRS

Specific function: In the presence of manganese, it represses the manganese transporter mnth [C]

COG id: COG1321

COG function: function code K; Mn-dependent transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH dtxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787038, Length=115, Percent_Identity=37.3913043478261, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001367
- InterPro:   IPR022689
- InterPro:   IPR022687
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02742 Fe_dep_repr_C; PF01325 Fe_dep_repress [H]

EC number: NA

Molecular weight: Translated: 18426; Mature: 18426

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50944 HTH_DTXR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRTSEEISERMEDYLEALYLLSRRGSGRHVRISELSEYLEVSKPTALEMIRKLADRGL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCH
VEYERGLVKLTEKGREIGKEVWDRHREIASFLRFLGVDPKIAERDACAIEHSLHPQSFRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
LRKLFHLLKEATGEPTVREILDKVRGEEGDSDGVRHRS
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRRTSEEISERMEDYLEALYLLSRRGSGRHVRISELSEYLEVSKPTALEMIRKLADRGL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCH
VEYERGLVKLTEKGREIGKEVWDRHREIASFLRFLGVDPKIAERDACAIEHSLHPQSFRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHH
LRKLFHLLKEATGEPTVREILDKVRGEEGDSDGVRHRS
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]